Factsheet for TraesCS6A01G084000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G113100.1	Wheat	cytosol	87.89	90.15
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	83.92	81.21
Os02t0125500-00	Rice	cytosol	55.95	61.05
Zm00001d015093_P001	Maize	cytosol	54.49	55.77
KXG29352	Sorghum	cytosol	56.58	52.52
Solyc05g041740.1.1	Tomato	plastid	18.58	42.38
KRH19104	Soybean	nucleus	35.7	39.22
TraesCS1A01G216900.1	Wheat	cytosol	36.74	39.11
KRH02776	Soybean	nucleus	35.28	38.76
KRH12329	Soybean	cytosol, nucleus	35.49	38.46
KRH37335	Soybean	cytosol, nucleus	34.66	37.47
Solyc08g074330.1.1	Tomato	plastid	17.75	37.44
Solyc05g043210.1.1	Tomato	plastid	19.62	37.15
VIT_11s0052g00030.t01	Wine grape	plastid	36.12	37.12
PGSC0003DMT400076105	Potato	plastid	34.03	35.28
Solyc07g008490.2.1	Tomato	nucleus	35.07	34.85
Bra019133.1-P	Field mustard	cytosol	27.14	32.66
CDX92741	Canola	cytosol	33.19	32.25
CDY42768	Canola	cytosol	33.19	32.25
GSMUA_Achr8P14980_001	Banana	cytosol	37.58	32.14
GSMUA_Achr11P...	Banana	mitochondrion	38.0	31.76
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	31.11	31.04
AT4G26000.1	Thale cress	cytosol	31.94	30.91
CDX89376	Canola	cytosol	26.72	30.12
Bra013940.1-P	Field mustard	cytosol	26.51	29.88
CDY65294	Canola	cytosol	27.35	29.84
Solyc05g042180.1.1	Tomato	plastid	16.28	28.57
PGSC0003DMT400046406	Potato	cytosol	34.86	28.31
Solyc05g043200.1.1	Tomato	nucleus, peroxisome, plastid	18.37	27.5
TraesCS5A01G059500.1	Wheat	cytosol	28.6	26.35
TraesCS4A01G245800.1	Wheat	nucleus	28.81	26.29
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	22.76	18.2
TraesCS4A01G150800.1	Wheat	nucleus	16.49	14.66
TraesCS3A01G512500.1	Wheat	nucleus	15.03	11.41
TraesCS4A01G333900.1	Wheat	nucleus	15.03	11.39
TraesCS3A01G158700.1	Wheat	nucleus	15.24	10.35
TraesCS1A01G164200.3	Wheat	nucleus	17.75	10.11
TraesCS5A01G276800.5	Wheat	plastid	11.69	8.93
TraesCS7A01G333800.1	Wheat	nucleus	11.06	7.93

Protein Annotations

EnsemblPlants:TraesCS6A01G084000.1	EnsemblPlantsGene:TraesCS6A01G084000	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PANTHER:PTHR10288	PANTHER:PTHR10288:SF169	PFAM:PF00013	PFscan:PS50084	SEG:seg	SMART:SM00322
SUPFAM:SSF54791	TIGR:cd00105	TIGR:cd02396	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6A:+:52316671..52321944

Molecular Weight (calculated)

51863.7 Da

IEP (calculated)

4.984

GRAVY (calculated)

-0.264

Length

479 amino acids

Sequence
(BLAST)

001: MAAAAPPLAE FARDAMAYVA EEEEEEDPEE VEPWVSSDSE PDEHPAPKPR SPSPDTQPEQ PPPPPPPAPT NSASEVAEEG KKAAPWPGFP GASVFRLVVA
101: GDKVGGLIGR RGEIVKRLCD ETRARVRVLD ATDGVSSRIV LISATEETQA ELAPAMDAAV RIFKHVNDIE GINPDVTLSA SAPEICCARL LVPKAQAVHL
201: IGKQGTMIKL MQETTGATMR IIDQDDFLSN QMVVERIVEI RGASLKVLNA LKSVLGLLRK FLVDHSVLHL FERKNQAVTE VQDSCKENQV TNGYALPVNQ
301: DLLLSDSRSP LNLNGSRYLS YGHDPSVCDP YSPDIRRPTV SLISKIMQTM QIPLLQAEEI IGVRGQTIAH IRSVSGAVVV LEETGNYLDE VLVSIEGTSS
401: QVQTAHQLIQ EVLLGDGKVL PPRSSSYGNP EAGPVRPPFA PRGAAPASPE YAPPLYRDYR SLSGSVRHCH SAAYHGYRL

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.