Factsheet for Os02t0125500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G113100.1	Wheat	cytosol	60.59	56.96
TraesCS6A01G084000.1	Wheat	cytosol	61.05	55.95
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	59.45	52.73
Zm00001d015093_P001	Maize	cytosol	53.76	50.43
KXG29352	Sorghum	cytosol	55.35	47.09
Solyc05g041740.1.1	Tomato	plastid	20.27	42.38
Solyc08g074330.1.1	Tomato	plastid	20.27	39.21
Solyc05g043210.1.1	Tomato	plastid	21.41	37.15
Os10t0564000-01	Rice	cytosol	38.5	36.9
KRH19104	Soybean	nucleus	36.45	36.7
KRH12329	Soybean	cytosol, nucleus	36.67	36.43
KRH02776	Soybean	nucleus	35.76	36.01
KRH37335	Soybean	cytosol, nucleus	35.99	35.67
VIT_11s0052g00030.t01	Wine grape	plastid	37.59	35.41
PGSC0003DMT400076105	Potato	plastid	35.31	33.55
Solyc07g008490.2.1	Tomato	nucleus	35.76	32.57
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	33.94	31.04
AT4G26000.1	Thale cress	cytosol	34.4	30.51
CDY42768	Canola	cytosol	34.17	30.43
Solyc05g042180.1.1	Tomato	plastid	18.91	30.4
CDX89376	Canola	cytosol	28.93	29.88
GSMUA_Achr8P14980_001	Banana	cytosol	38.04	29.82
CDX92741	Canola	cytosol	33.49	29.82
Bra019133.1-P	Field mustard	cytosol	26.88	29.65
Bra013940.1-P	Field mustard	cytosol	28.7	29.65
GSMUA_Achr11P...	Banana	mitochondrion	38.5	29.49
CDY65294	Canola	cytosol	28.93	28.93
Os03t0627500-01	Rice	cytosol	31.89	27.45
PGSC0003DMT400046406	Potato	cytosol	36.22	26.95
Solyc05g043200.1.1	Tomato	nucleus, peroxisome, plastid	18.68	25.62
Os12t0597600-01	Rice	cytosol	8.66	22.89
Os10t0414700-01	Rice	nucleus	24.83	17.5
Os03t0376800-02	Rice	nucleus	16.86	13.65
Os10t0495000-01	Rice	nucleus	16.17	9.32
Os06t0342500-01	Rice	cytosol	13.9	9.21
Os01t0235800-01	Rice	cytosol	9.11	8.55
Os09t0498600-01	Rice	plastid	9.79	6.98
Os07t0439100-01	Rice	cytosol	1.37	2.58
Os08t0200300-02	Rice	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os02t0125500-00	EnsemblPlantsGene:Os02g0125500	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PANTHER:PTHR10288	PANTHER:PTHR10288:SF169	PFAM:PF00013	PFscan:PS50084	ProteinID:BAS76760.1	SEG:seg
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI0003938794	UniProt:A0A0P0VE90	MapMan:35.1	:

Description

K Homology domain containing protein. (Os02t0125500-00)

Coordinates

chr2:+:1334563..1337685

Molecular Weight (calculated)

47753.5 Da

IEP (calculated)

4.605

GRAVY (calculated)

-0.265

Length

439 amino acids

Sequence
(BLAST)

001: MAVPDEVAAD ADAEVEEEEP EEVEWLSSSS DSEPEHPALK QWTPSSPDSE EAEAEQQPSA PQPASSVSAG KEDEGEVGLE EGEVGKPFRW PGWPGASVFR
101: LVVATDKVGG LIGRRGDTIK RLCEDTRARV RVLEAAAAAA ANRIVLISAT EESQAELPPA MDAAIKIFMH INDIEKINCD DTLSGSAPEK CSAKLLVPSA
201: QATHLIGKQG VRIKSIQETT GATVKIIDKV ELLSYDVVDE RIVDIHGAPL KVLHALKSVL GVLRKFLVDH GVLHLFERKN QAVGEAHDNS KENQVNQVAS
301: DYRLPVNKDI LLPDHRTPLN PKVSRYLLYG RDPSVCDPYL SDPSHQANAI IQQITQTMQI PLPFAEEIIG ARGQNISYIR SVSGAVVDLE ESRDYPNEVL
401: VMIKGSSSQV QTAHQLVQVD NLCPDVHCCS CILVTVKMP

Best Arabidopsis Sequence Match ( AT4G26000.1 )
(BLAST)

001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL

Arabidopsis Description

PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.