Factsheet for AT4G26000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019133.1-P	Field mustard	cytosol	67.88	84.42
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	80.4	82.92
CDX92741	Canola	cytosol	82.42	82.76
CDY42768	Canola	cytosol	82.22	82.56
CDX89376	Canola	cytosol	55.35	64.47
CDY65294	Canola	cytosol	57.17	64.46
Bra013940.1-P	Field mustard	cytosol	54.95	64.0
KRH02776	Soybean	nucleus	52.73	59.86
KRH19104	Soybean	nucleus	52.73	59.86
VIT_11s0052g00030.t01	Wine grape	plastid	54.95	58.37
KRH37335	Soybean	cytosol, nucleus	51.52	57.56
KRH12329	Soybean	cytosol, nucleus	51.31	57.47
Solyc07g008490.2.1	Tomato	nucleus	48.28	49.59
TraesCS1D01G218700.1	Wheat	cytosol	43.23	47.56
TraesCS1B01G229900.1	Wheat	cytosol	43.03	47.44
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	42.22	47.39
TraesCS1A01G216900.1	Wheat	cytosol	43.03	47.33
Os10t0564000-01	Rice	cytosol	43.64	47.16
Zm00001d029973_P001	Maize	plasma membrane	42.63	47.1
EER94472	Sorghum	cytosol	42.63	46.68
HORVU1Hr1G055480.1	Barley	plastid	43.64	43.03
GSMUA_Achr8P14980_001	Banana	cytosol	46.87	41.43
PGSC0003DMT400046406	Potato	cytosol	49.09	41.19
GSMUA_Achr11P...	Banana	mitochondrion	46.46	40.14
Os02t0125500-00	Rice	cytosol	30.51	34.4
Zm00001d015093_P001	Maize	cytosol	31.11	32.91
KXG29352	Sorghum	cytosol	33.54	32.17
TraesCS6B01G113100.1	Wheat	cytosol	30.3	32.12
TraesCS6A01G084000.1	Wheat	cytosol	30.91	31.94
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	30.91	30.91
AT3G04610.2	Thale cress	cytosol	33.54	28.77
AT2G03110.1	Thale cress	cytosol	6.87	22.22
AT5G15270.2	Thale cress	nucleus	18.18	16.42
AT1G14170.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	15.35	15.87
AT4G18375.2	Thale cress	nucleus	16.97	13.86
AT1G51580.1	Thale cress	cytosol, plastid	17.37	13.85
AT5G46190.2	Thale cress	cytosol	18.18	13.06
AT5G09560.1	Thale cress	cytosol	14.75	12.17
AT2G22600.1	Thale cress	mitochondrion	15.35	12.03
AT5G53060.1	Thale cress	nucleus	14.55	11.04
AT5G64390.3	Thale cress	nucleus	18.18	10.39

Protein Annotations

Gene3D:3.30.1370.10	MapMan:35.1	EntrezGene:828706	ProteinID:AEE85142.1	ArrayExpress:AT4G26000	EnsemblPlantsGene:AT4G26000
RefSeq:AT4G26000	TAIR:AT4G26000	RefSeq:AT4G26000-TAIR-G	EnsemblPlants:AT4G26000.1	TAIR:AT4G26000.1	EMBL:AY056288
EMBL:AY099659	EMBL:AY114064	Unigene:At.66652	ProteinID:CAB39665.1	ProteinID:CAB79455.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006396	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009299
GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0048367	GO:GO:0048467
GO:GO:0048577	GO:GO:0048579	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
RefSeq:NP_194330.1	Symbol:PEP	PFAM:PF00013	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF132	UniProt:Q9SZH4	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI00000A89AB	:	:	:	:	:

Description

PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]

Coordinates

chr4:+:13197069..13199841

Molecular Weight (calculated)

54027.7 Da

IEP (calculated)

4.653

GRAVY (calculated)

-0.291

Length

495 amino acids

Sequence
(BLAST)

001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.