Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45180 | Canola | cytosol | 73.86 | 26.71 |
| CDY03018 | Canola | nucleus | 74.51 | 24.36 |
| AT1G14170.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 70.59 | 22.55 |
| Bra024789.1-P | Field mustard | cytosol | 50.33 | 20.48 |
| PGSC0003DMT400047374 | Potato | nucleus | 55.56 | 15.95 |
| Solyc05g007810.2.1 | Tomato | nucleus | 54.25 | 15.6 |
| Zm00001d029328_P002 | Maize | nucleus | 54.9 | 15.53 |
| GSMUA_Achr6P10750_001 | Banana | nucleus | 53.59 | 15.41 |
| TraesCS4A01G150800.1 | Wheat | nucleus | 54.25 | 15.4 |
| Os03t0376800-02 | Rice | nucleus | 54.25 | 15.31 |
| GSMUA_Achr7P11520_001 | Banana | mitochondrion, nucleus | 52.94 | 15.28 |
| VIT_01s0026g02650.t01 | Wine grape | nucleus | 56.86 | 15.21 |
| KXG39277 | Sorghum | nucleus | 53.59 | 15.13 |
| TraesCS4D01G160700.2 | Wheat | nucleus | 54.9 | 14.92 |
| TraesCS4B01G166500.2 | Wheat | nucleus | 54.9 | 14.92 |
| HORVU4Hr1G049680.1 | Barley | nucleus | 55.56 | 14.6 |
| AT5G15270.2 | Thale cress | nucleus | 47.71 | 13.32 |
| AT4G18375.2 | Thale cress | nucleus | 32.68 | 8.25 |
| AT5G53060.1 | Thale cress | nucleus | 32.03 | 7.52 |
| AT5G46190.2 | Thale cress | cytosol | 32.03 | 7.11 |
| AT1G51580.1 | Thale cress | cytosol, plastid | 28.76 | 7.09 |
| AT4G26000.1 | Thale cress | cytosol | 22.22 | 6.87 |
| AT2G22600.1 | Thale cress | mitochondrion | 28.1 | 6.8 |
| AT3G04610.2 | Thale cress | cytosol | 25.49 | 6.76 |
| AT5G09560.1 | Thale cress | cytosol | 19.61 | 5.0 |
| AT5G64390.3 | Thale cress | nucleus | 28.1 | 4.97 |
Protein Annotations
| Gene3D:3.30.310.210 | MapMan:35.2 | EntrezGene:814840 | ProteinID:AEC05664.1 | ProteinID:ANM61646.1 | ProteinID:ANM61647.1 |
| ArrayExpress:AT2G03110 | EnsemblPlantsGene:AT2G03110 | RefSeq:AT2G03110 | TAIR:AT2G03110 | RefSeq:AT2G03110-TAIR-G | EnsemblPlants:AT2G03110.1 |
| TAIR:AT2G03110.1 | Unigene:At.23438 | EMBL:BT012113 | EMBL:BT012369 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0008150 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 |
| InterPro:KH_dom_type_1_sf | RefSeq:NP_001318188.1 | RefSeq:NP_001323851.1 | RefSeq:NP_178410.2 | PFAM:PF00013 | PFscan:PS50084 |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF149 | UniProt:Q6NLG5 | SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI0000350B1B |
| SEG:seg | : | : | : | : | : |
Description
At2g03110 [Source:UniProtKB/TrEMBL;Acc:Q6NLG5]
Coordinates
chr2:+:934797..936862
Molecular Weight (calculated)
17377.2 Da
IEP (calculated)
3.939
GRAVY (calculated)
-0.373
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVNEALPGC DERVVTIYSN SEERNRIEDD NEDFVCPAFD ALFKVHDMVV VEEFDDDDDY NDNDEYSEGQ TVVTVRMLVP SDQIGYLIGK GGPIIQTLRN
101: DTNAQIRVRN DNLPMCALAL SHDELLQIIG DPSAVREALY QVAFLLYNNP SRF
101: DTNAQIRVRN DNLPMCALAL SHDELLQIIG DPSAVREALY QVAFLLYNNP SRF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.