CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013940.1-P	Field mustard	cytosol	99.53	99.53
CDY65294	Canola	cytosol	92.47	89.52
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	63.29	56.04
CDX92741	Canola	cytosol	64.71	55.78
CDY42768	Canola	cytosol	64.24	55.38
AT4G26000.1	Thale cress	cytosol	64.47	55.35
KRH02776	Soybean	nucleus	44.24	43.12
KRH19104	Soybean	nucleus	44.0	42.89
VIT_11s0052g00030.t01	Wine grape	plastid	45.88	41.85
KRH12329	Soybean	cytosol, nucleus	42.59	40.95
KRH37335	Soybean	cytosol, nucleus	42.12	40.41
Solyc07g008490.2.1	Tomato	nucleus	40.94	36.1
Os10t0564000-01	Rice	cytosol	37.88	35.15
TraesCS1D01G218700.1	Wheat	cytosol	37.18	35.11
TraesCS1B01G229900.1	Wheat	cytosol	36.94	34.97
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	36.24	34.92
TraesCS1A01G216900.1	Wheat	cytosol	36.94	34.89
Zm00001d029973_P001	Maize	plasma membrane	36.71	34.82
EER94472	Sorghum	cytosol	36.47	34.29
HORVU1Hr1G055480.1	Barley	plastid	37.41	31.67
PGSC0003DMT400046406	Potato	cytosol	41.41	29.83
GSMUA_Achr8P14980_001	Banana	cytosol	38.82	29.46
Os02t0125500-00	Rice	cytosol	29.88	28.93
GSMUA_Achr11P...	Banana	mitochondrion	38.59	28.62
Zm00001d015093_P001	Maize	cytosol	31.06	28.21
TraesCS6B01G113100.1	Wheat	cytosol	29.41	26.77
KXG29352	Sorghum	cytosol	32.47	26.74
TraesCS6A01G084000.1	Wheat	cytosol	30.12	26.72
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	29.65	25.45
CDX99471	Canola	nucleus	12.47	24.65
CDY64706	Canola	nucleus	22.35	23.51
CDX74180	Canola	cytosol	30.35	22.91
CDY40663	Canola	cytosol	30.35	22.91
CDY60930	Canola	nucleus	19.06	15.23
CDX69536	Canola	nucleus	18.82	15.04
CDY03018	Canola	nucleus	16.24	14.74
CDX81615	Canola	cytosol	15.76	14.6
CDY49107	Canola	nucleus	16.24	14.53
CDX70604	Canola	nucleus	19.76	14.48
CDY33769	Canola	nucleus	16.24	14.23
CDX78623	Canola	nucleus	20.0	14.17
CDY39336	Canola	mitochondrion	15.76	14.16
CDY45180	Canola	cytosol	13.18	13.24
CDX78846	Canola	nucleus	16.94	12.54
CDX77643	Canola	nucleus	18.82	12.52
CDY33460	Canola	nucleus	18.82	12.48
CDY52947	Canola	plastid	16.0	11.81
CDY46555	Canola	plastid	16.0	11.7
CDX96185	Canola	nucleus	16.71	11.08
CDX89490	Canola	cytosol	15.29	10.5
CDX84522	Canola	nucleus	18.12	10.39
CDY13742	Canola	mitochondrion	15.29	10.38
CDY27030	Canola	nucleus	16.24	10.38
CDY25609	Canola	cytosol	15.06	10.31
CDY49453	Canola	nucleus	15.29	10.12
CDY56908	Canola	nucleus	15.06	10.06
CDX76904	Canola	mitochondrion, nucleus, peroxisome, plastid	14.59	9.83
CDY51849	Canola	cytosol	2.12	8.49
CDX99470	Canola	nucleus	4.94	7.75

Protein Annotations

EnsemblPlants:CDX89376	EnsemblPlantsGene:GSBRNA2T00149607001	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:A0A078DJJ3	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1
InterPro:KH_dom_type_1_sf	PANTHER:PTHR10288	PANTHER:PTHR10288:SF132	PFAM:PF00013	PFscan:PS50084	ProteinID:CDX89376
ProteinID:CDX89376.1	SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI0004EDAD9A	MapMan:35.1	:

Description

BnaA01g15170D

Coordinates

chrLK031858:-:1217838..1219973

Molecular Weight (calculated)

46147.7 Da

IEP (calculated)

5.187

GRAVY (calculated)

-0.208

Length

425 amino acids

Sequence
(BLAST)

001: MSAVADSVKN GPLKLPENEN LTPSGVSATA FPNENSGAAE RWPGFPGDCV FRLIIPAHKV GAITGRQGEF IRKLWQETRA RIQVLDGPVT THNRLVIISG
101: KEKPEANMSP AMEAVVRVFR RIARLPDNDD DDQNAVSAYS SVRLLVPGTQ ALSLIGKQGS IIKSIVQNSG ASVRILSQDA TPWYAAEDER IVAFHGEALK
201: IVKALEAVVG HLRKYLVDHF VIPFFEEEYL ARVFQEDGAL ADKNPSLPAE PSNVTDSDSW LLARREALVL EGKNRVESRV QPSGVLFTQE DPIFSAIEVC
301: QTVRAPISYS DDIIGSGGAN INYIRWRSGA ILIVEESLNP GEMILVIKGT FSQVEIAYQL IQELVSTQKD PVSVSGGNAR IDTGNVPVNP PQLSNRQETL
401: SSSYMGTETG PNASSQVTGP SPSRH

Best Arabidopsis Sequence Match ( AT4G26000.1 )
(BLAST)

001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL

Arabidopsis Description

PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.