Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001111.1-P | Field mustard | cytosol | 68.56 | 98.97 |
| CDX74180 | Canola | cytosol | 98.05 | 98.05 |
| CDY64706 | Canola | nucleus | 62.7 | 87.38 |
| AT3G04610.2 | Thale cress | cytosol | 87.39 | 85.27 |
| KRH68752 | Soybean | cytoskeleton, cytosol, nucleus | 52.75 | 67.04 |
| KRG97000 | Soybean | nucleus | 52.58 | 66.37 |
| Solyc01g097010.2.1 | Tomato | nucleus | 42.63 | 66.12 |
| VIT_14s0081g00440.t01 | Wine grape | cytosol | 55.59 | 61.25 |
| GSMUA_Achr7P01590_001 | Banana | nucleus | 45.83 | 58.64 |
| GSMUA_Achr5P03200_001 | Banana | cytosol | 25.93 | 55.09 |
| Os03t0627500-01 | Rice | cytosol | 45.12 | 49.8 |
| EES16283 | Sorghum | cytosol | 43.87 | 48.53 |
| TraesCS4B01G069700.1 | Wheat | nucleus | 43.52 | 47.95 |
| TraesCS4D01G068400.1 | Wheat | nucleus | 43.52 | 47.67 |
| Zm00001d030968_P006 | Maize | extracellular | 42.98 | 47.64 |
| TraesCS4A01G245800.1 | Wheat | nucleus | 42.98 | 46.1 |
| TraesCS5D01G071000.1 | Wheat | nucleus | 42.27 | 45.86 |
| TraesCS5B01G066800.1 | Wheat | nucleus | 42.27 | 45.77 |
| TraesCS5A01G059500.1 | Wheat | cytosol | 42.27 | 45.77 |
| HORVU4Hr1G011610.11 | Barley | cytoskeleton, cytosol, nucleus | 43.52 | 45.2 |
| OQU91315 | Sorghum | plastid | 34.99 | 40.53 |
| HORVU1Hr1G036300.1 | Barley | cytosol | 12.26 | 37.91 |
| Zm00001d013712_P003 | Maize | cytosol, plastid, vacuole | 42.27 | 36.23 |
| CDY49999 | Canola | cytosol, endoplasmic reticulum, nucleus | 28.95 | 33.96 |
| Os12t0597600-01 | Rice | cytosol | 9.77 | 33.13 |
| CDY42768 | Canola | cytosol | 28.77 | 32.86 |
| CDX92741 | Canola | cytosol | 28.6 | 32.66 |
| CDX89376 | Canola | cytosol | 22.91 | 30.35 |
| CDY65294 | Canola | cytosol | 22.56 | 28.93 |
| CDX99471 | Canola | nucleus | 10.83 | 28.37 |
| EER94248 | Sorghum | nucleus | 28.06 | 26.87 |
| Zm00001d003290_P002 | Maize | mitochondrion | 10.66 | 26.2 |
| TraesCS1A01G136600.1 | Wheat | cytosol, mitochondrion, nucleus | 27.18 | 25.54 |
| TraesCS1D01G134700.1 | Wheat | cytosol | 27.18 | 25.5 |
| TraesCS1B01G155000.1 | Wheat | cytosol, mitochondrion, nucleus | 27.0 | 25.38 |
| Zm00001d014180_P004 | Maize | cytosol | 27.35 | 23.8 |
| Os10t0414700-01 | Rice | nucleus | 25.22 | 22.79 |
| HORVU1Hr1G036280.1 | Barley | cytosol | 15.28 | 20.98 |
| Zm00001d010815_P001 | Maize | mitochondrion | 12.08 | 19.43 |
| CDY03018 | Canola | nucleus | 15.81 | 19.02 |
| CDX81615 | Canola | cytosol | 15.45 | 18.95 |
| CDY39336 | Canola | mitochondrion | 15.63 | 18.6 |
| CDY33769 | Canola | nucleus | 15.81 | 18.35 |
| CDY49107 | Canola | nucleus | 15.45 | 18.32 |
| CDX69536 | Canola | nucleus | 17.05 | 18.05 |
| CDY60930 | Canola | nucleus | 16.87 | 17.86 |
| CDY45180 | Canola | cytosol | 12.61 | 16.78 |
| CDX70604 | Canola | nucleus | 17.05 | 16.55 |
| CDX78846 | Canola | nucleus | 16.87 | 16.55 |
| CDX78623 | Canola | nucleus | 16.87 | 15.83 |
| CDX77643 | Canola | nucleus | 17.94 | 15.81 |
| CDY33460 | Canola | nucleus | 17.94 | 15.76 |
| CDY46555 | Canola | plastid | 14.03 | 13.6 |
| CDY52947 | Canola | plastid | 13.85 | 13.54 |
| CDY49453 | Canola | nucleus | 14.03 | 12.31 |
| CDY56908 | Canola | nucleus | 13.85 | 12.26 |
| CDX96185 | Canola | nucleus | 13.32 | 11.7 |
| CDY27030 | Canola | nucleus | 13.5 | 11.43 |
| CDX89490 | Canola | cytosol | 12.08 | 10.99 |
| CDX84522 | Canola | nucleus | 14.39 | 10.93 |
| CDY13742 | Canola | mitochondrion | 12.08 | 10.86 |
| CDY25609 | Canola | cytosol | 11.9 | 10.79 |
| CDX76904 | Canola | mitochondrion, nucleus, peroxisome, plastid | 12.08 | 10.78 |
| CDY51849 | Canola | cytosol | 1.95 | 10.38 |
| CDX99470 | Canola | nucleus | 4.8 | 9.96 |
Protein Annotations
| Gene3D:3.30.1370.10 | Gene3D:3.30.310.210 | MapMan:35.1 | GO:A0A078HV69 | UniProt:A0A078HV69 | EnsemblPlants:CDY40663 |
| ProteinID:CDY40663 | ProteinID:CDY40663.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00071536001 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 |
| PFscan:PS50084 | PANTHER:PTHR10288 | PANTHER:PTHR10288:SF224 | SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI0004EE615A |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g33790DBnaC03g33790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV69]
Coordinates
chrLK032477:-:21382..25314
Molecular Weight (calculated)
61294.0 Da
IEP (calculated)
4.160
GRAVY (calculated)
-0.733
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAEDQQNF VANNGDEVPE DGLDEVHNGL QYQVDDETLG HQPYQVQDPV LEPEQYEVQD PGFEPQEFAG QLEYNDYQVQ DDQVSEEVQD QPRDELQYQP
101: QDQEEYQLQE QAEYQVEGEA GDQDGDEVQD QGEGEEGVPE RVEDLEKSEP EGDATAGGEE KRWPGWPGET VFRMLVPAQK VGSIIGRKGD VIKKIVEETR
201: ARIKILDGPP GTTERAVMVS GKEEPESSLP PSMDGLLRVH MRIVDGLDGE ASQAPPPTKV STRLLVPASQ AGSLIGKQGA TVKAIQEAAG CIVRVLGSED
301: LPVFALQDDR VVEVVGEPTS VHKSLELIAS HLRKFLVDRS IIPYFESQMQ KPTRQMDHMP PPHQAWGPPQ GHAPSGGGGP GYGHNPPPYM QQPPPRHDNY
401: YPPPEMRQPP MEKQPHQGIS AYGREPPMNV HVSAAPPMAA QQVTQQLQIQ LSYADAVIGT SGSNISYTRR LSGATVTIQE TRGVPGEMTV EVSGTGSQVQ
501: TAVQLIQNFM AEAGAPAPAQ PQTVVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY
101: QDQEEYQLQE QAEYQVEGEA GDQDGDEVQD QGEGEEGVPE RVEDLEKSEP EGDATAGGEE KRWPGWPGET VFRMLVPAQK VGSIIGRKGD VIKKIVEETR
201: ARIKILDGPP GTTERAVMVS GKEEPESSLP PSMDGLLRVH MRIVDGLDGE ASQAPPPTKV STRLLVPASQ AGSLIGKQGA TVKAIQEAAG CIVRVLGSED
301: LPVFALQDDR VVEVVGEPTS VHKSLELIAS HLRKFLVDRS IIPYFESQMQ KPTRQMDHMP PPHQAWGPPQ GHAPSGGGGP GYGHNPPPYM QQPPPRHDNY
401: YPPPEMRQPP MEKQPHQGIS AYGREPPMNV HVSAAPPMAA QQVTQQLQIQ LSYADAVIGT SGSNISYTRR LSGATVTIQE TRGVPGEMTV EVSGTGSQVQ
501: TAVQLIQNFM AEAGAPAPAQ PQTVVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY
001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY
Arabidopsis Description
FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.