Factsheet for Zm00001d010815_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003290_P002	Maize	mitochondrion	60.57	92.58
HORVU1Hr1G036300.1	Barley	cytosol	27.71	53.3
EER94248	Sorghum	nucleus	42.57	25.34
Zm00001d014180_P004	Maize	cytosol	44.0	23.8
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	33.71	19.7
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	33.71	19.7
TraesCS1D01G134700.1	Wheat	cytosol	33.14	19.33
Os10t0414700-01	Rice	nucleus	33.71	18.94
Solyc06g084010.2.1	Tomato	nucleus	16.86	18.27
KRG97000	Soybean	nucleus	21.14	16.59
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	20.86	16.48
VIT_07s0141g00800.t01	Wine grape	cytosol	20.0	16.17
Zm00001d029973_P001	Maize	plasma membrane	19.43	15.18
Bra001111.1-P	Field mustard	cytosol	16.86	15.13
CDY64706	Canola	nucleus	17.43	15.1
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	18.29	14.51
VIT_14s0081g00440.t01	Wine grape	cytosol	20.57	14.09
KRH67322	Soybean	nucleus	21.14	13.99
KRG95633	Soybean	nucleus	21.14	13.78
PGSC0003DMT400051262	Potato	nucleus	19.71	13.74
KRH71306	Soybean	nucleus	19.43	13.74
Solyc09g066120.2.1	Tomato	nucleus	19.14	13.62
PGSC0003DMT400051668	Potato	cytosol	19.43	13.28
Zm00001d015093_P001	Maize	cytosol	17.71	13.25
Zm00001d030968_P006	Maize	extracellular	18.0	12.4
CDY40663	Canola	cytosol	19.43	12.08
CDX74180	Canola	cytosol	19.43	12.08
AT3G04610.2	Thale cress	cytosol	19.71	11.96
Solyc01g097010.2.1	Tomato	nucleus	12.29	11.85
KRH32136	Soybean	cytosol	18.86	11.68
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	20.57	10.96
Zm00001d029328_P002	Maize	nucleus	16.57	10.72
Zm00001d024270_P001	Maize	nucleus	13.43	7.44
Zm00001d049390_P001	Maize	nucleus	12.57	6.97
Zm00001d013963_P002	Maize	nucleus	14.29	6.13
Zm00001d046033_P001	Maize	nucleus	11.43	6.0
Zm00001d009014_P004	Maize	nucleus	12.0	5.96
HORVU1Hr1G036280.1	Barley	cytosol	6.57	5.61
Zm00001d019538_P002	Maize	plastid	10.57	5.48
Zm00001d037055_P003	Maize	nucleus	11.14	5.27
Zm00001d032597_P006	Maize	golgi, plasma membrane	14.57	5.17
Zm00001d006055_P002	Maize	plastid	7.43	4.17
Solyc06g084000.2.1	Tomato	nucleus	2.29	3.38

Protein Annotations

Gene3D:3.30.1370.10	MapMan:35.1	UniProt:A0A1D6FU64	ProteinID:AQK95015.1	InterPro:DYW_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	GO:GO:0008270	InterPro:IPR002083
InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	InterPro:MATH/TRAF_dom	PFAM:PF00013
PFAM:PF14432	PFscan:PS50084	PFscan:PS50144	PANTHER:PTHR10288	PANTHER:PTHR10288:SF152	SMART:SM00322
SUPFAM:SSF54791	UniParc:UPI000843B824	EnsemblPlantsGene:Zm00001d010815	EnsemblPlants:Zm00001d010815_P001	EnsemblPlants:Zm00001d010815_T001	SEG:seg

Description

Flowering locus K homology domain

Coordinates

chr8:-:128686829..128689613

Molecular Weight (calculated)

39500.7 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.039

Length

350 amino acids

Sequence
(BLAST)

001: MARFTPLTTR SFSSPTRWSS MVISLFFTTE FSLLLLLYIH PSETLEKQIV GYFPDVTEVF VEVTEEEKQN VLYWHNEKLT VAFALLSSEP NTMIRIVKNL
101: RMCLDCHNTI KLISRLYGRE VVVRDRTRFH HFRHGFCSCK DYRMLIPAQK VGAIIGHKGE RVKRLCEETR ACVRIIGGHL CAAEQAVIIF GREQLDEPLP
201: PAMDALLRVY QQTINNDSLD VGPDNVIVRQ ILAPSEQAAS LIGEHGVMIN SIMEASQTDI RVLGNELPSD LIDTLLKWIP SNDEELRLRL SSRSTATPHA
301: SVAAFASAPV SHTAPWLGKF IAFEPFNVGG FDWAIYFYPD GKSGEDGMLK

Best Arabidopsis Sequence Match ( AT4G21065.2 )
(BLAST)

001: MADVRLGETI HSVVIRSGFG SLIYVQNSLL HLYANCGDVA SAYKVFDKMP EKDLVAWNSV INGFAENGKP EEALALYTEM NSKGIKPDGF TIVSLLSACA
101: KIGALTLGKR VHVYMIKVGL TRNLHSSNVL LDLYARCGRV EEAKTLFDEM VDKNSVSWTS LIVGLAVNGF GKEAIELFKY MESTEGLLPC EITFVGILYA
201: CSHCGMVKEG FEYFRRMREE YKIEPRIEHF GCMVDLLARA GQVKKAYEYI KSMPMQPNVV IWRTLLGACT VHGDSDLAEF ARIQILQLEP NHSGDYVLLS
301: NMYASEQRWS DVQKIRKQML RDGVKKVPGH SLVEVGNRVH EFLMGDKSHP QSDAIYAKLK EMTGRLRSEG YVPQISNVYV DVEEEEKENA VVYHSEKIAI
401: AFMLISTPER SPITVVKNLR VCADCHLAIK LVSKVYNREI VVRDRSRFHH FKNGSCSCQD YW

Arabidopsis Description

PCMP-H28Pentatricopeptide repeat-containing protein At4g21065 [Source:UniProtKB/Swiss-Prot;Acc:A8MQA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.