Factsheet for Zm00001d009014_P004

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02175	Sorghum	nucleus, plastid	88.79	87.43
Os01t0235800-01	Rice	cytosol	46.1	69.44
TraesCS3B01G189700.1	Wheat	nucleus	65.96	65.68
TraesCS3D01G166400.1	Wheat	cytosol, mitochondrion, nucleus	65.11	65.11
TraesCS3A01G158700.1	Wheat	nucleus	64.96	64.96
HORVU3Hr1G057270.16	Barley	plastid	63.69	57.86
GSMUA_Achr6P13890_001	Banana	cytosol	42.98	46.26
GSMUA_Achr10P...	Banana	cytosol	43.12	45.92
VIT_18s0001g08280.t01	Wine grape	cytosol	42.98	43.22
KRH52837	Soybean	plastid	40.57	42.31
KRH62129	Soybean	plastid	40.43	42.04
PGSC0003DMT400012623	Potato	nucleus, plastid	38.16	39.85
Solyc04g077060.2.1	Tomato	nucleus	26.38	39.32
Zm00001d029328_P002	Maize	nucleus	20.71	26.99
Zm00001d024270_P001	Maize	nucleus	22.41	25.0
Zm00001d006055_P002	Maize	plastid	21.84	24.68
Zm00001d049390_P001	Maize	nucleus	21.28	23.77
Zm00001d013963_P002	Maize	nucleus	24.82	21.45
Zm00001d046033_P001	Maize	nucleus	19.72	20.84
Zm00001d019538_P002	Maize	plastid	18.87	19.7
Zm00001d030968_P006	Maize	extracellular	13.76	19.09
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	11.63	18.59
Zm00001d037055_P003	Maize	nucleus	19.01	18.11
Zm00001d029973_P001	Maize	plasma membrane	11.49	18.08
Zm00001d032597_P006	Maize	golgi, plasma membrane	24.26	17.34
Zm00001d003290_P002	Maize	mitochondrion	5.53	17.03
Zm00001d015093_P001	Maize	cytosol	10.92	16.45
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	12.91	13.85
Zm00001d014180_P004	Maize	cytosol	12.2	13.29
Zm00001d010815_P001	Maize	mitochondrion	5.96	12.0

Protein Annotations

EntrezGene:100285619	Gene3D:3.30.1370.10	MapMan:35.1	ProteinID:AQK91198.1	ProteinID:AQK91200.1	UniProt:B6U784
EMBL:BT067023	EMBL:EU973099	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	PFAM:PF00013	PFscan:PS50084
PANTHER:PTHR10288	PANTHER:PTHR10288:SF148	SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI000182EB54	EnsemblPlantsGene:Zm00001d009014
EnsemblPlants:Zm00001d009014_P004	EnsemblPlants:Zm00001d009014_T004	SEG:seg	:	:	:

Description

KH domain-containing protein HEN4

Coordinates

chr8:+:30171354..30175411

Molecular Weight (calculated)

75487.8 Da

IEP (calculated)

6.059

GRAVY (calculated)

-0.413

Length

705 amino acids

Sequence
(BLAST)

001: MASRMTPSKR PFQRRSSDYD GRGKWQKTKH PSPHKSQFKI EPGVPIFRIL CPASKSGNVI GKGGAIIAKI RQETRMRIRV DRAAPGCDER VIFITAANKD
101: EEAGSEQGGE NDGGAAASTG GDHEKDKDNN SKEQNVDPEE NNCNEQNDDS EKGSGKEEID GFEKDHGTEE KNDSEKEHNK GEKDDPLVAK VTKLEPERVI
201: PLALKAVSLV FDRIFATEGN NETGNASAAS APVSLRMLVL YSQAGWLLGK GGSVVKQMAA DNGCEIRVLK DNLPSCALLN DKLCQITGEI DSVRKGLNAV
301: SEVLLAHPPK ETDAVADVHS SGSSSRSLFS QPDGLPSGMQ SNFHIPLQGP PSQANGPFDI VDLQPPIHGH ASVAIESLSF RMLCPQDKVG SIIGKGGNIV
401: KTIQNDTGCE IKVLDTVPKT DDRIISISGP AHPSDGISPA QNAILHVQRK IMLPSSDKKE GPATCRLIVS GNQVGCVLGK GGSIIAEMRK LSGAFIVVLS
501: KDKIPRGVPE HDEVIQINGS CEAIQEALMQ VTARLRNHLF RDRMPAVGPN MRPPFGLLDP QFGPFSGNHE SSSLFHKDFM GRPLDGIAAP WTVKGMRDLS
601: DPVSISDIPG AGHREAGGFP GPGQPSMMPN LTAEVLVPRL VIPVLCGEDG GCLDRIREFS EAKITVAEPT ADAMDTAVLI SGTPEQMHAA RSLVEAFVMS
701: ESFGP

Best Arabidopsis Sequence Match ( AT1G51580.1 )
(BLAST)

001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S

Arabidopsis Description

At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.