Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G189700.1 | Wheat | nucleus | 77.56 | 51.27 |
| TraesCS3D01G166400.1 | Wheat | cytosol, mitochondrion, nucleus | 76.71 | 50.92 |
| TraesCS3A01G158700.1 | Wheat | nucleus | 76.5 | 50.78 |
| EES02175 | Sorghum | nucleus, plastid | 71.15 | 46.51 |
| Zm00001d009014_P004 | Maize | nucleus | 69.44 | 46.1 |
| HORVU3Hr1G057270.16 | Barley | plastid | 75.85 | 45.75 |
| Solyc04g077060.2.1 | Tomato | nucleus | 41.03 | 40.59 |
| GSMUA_Achr6P13890_001 | Banana | cytosol | 54.27 | 38.78 |
| GSMUA_Achr10P... | Banana | cytosol | 53.63 | 37.92 |
| VIT_18s0001g08280.t01 | Wine grape | cytosol | 53.63 | 35.81 |
| PGSC0003DMT400012623 | Potato | nucleus, plastid | 47.01 | 32.59 |
| KRH52837 | Soybean | plastid | 46.79 | 32.4 |
| KRH62129 | Soybean | plastid | 46.58 | 32.15 |
| Os09t0498600-01 | Rice | plastid | 29.27 | 22.24 |
| Os03t0376800-02 | Rice | nucleus | 24.57 | 21.22 |
| Os07t0439100-01 | Rice | cytosol | 9.62 | 19.31 |
| Os06t0342500-01 | Rice | cytosol | 25.0 | 17.67 |
| Os10t0495000-01 | Rice | nucleus | 27.35 | 16.8 |
| Os03t0627500-01 | Rice | cytosol | 13.25 | 12.16 |
| Os10t0564000-01 | Rice | cytosol | 11.11 | 11.35 |
| Os10t0414700-01 | Rice | nucleus | 12.18 | 9.15 |
| Os02t0125500-00 | Rice | cytosol | 8.55 | 9.11 |
| Os08t0200300-02 | Rice | plastid | 0.0 | 0.0 |
| Os12t0597600-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0235800-01 | EnsemblPlantsGene:Os01g0235800 | Gene3D:3.30.1370.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PANTHER:PTHR10288 |
| PANTHER:PTHR10288:SF148 | PFAM:PF00013 | PFscan:PS50084 | ProteinID:BAS71225.1 | SEG:seg | SMART:SM00322 |
| SUPFAM:SSF54791 | UniParc:UPI0000DD8A31 | UniProt:A0A0N7KCM4 | MapMan:35.1 | : | : |
Description
K Homology domain containing protein. (Os01t0235800-01)
Coordinates
chr1:+:7507583..7511672
Molecular Weight (calculated)
49890.5 Da
IEP (calculated)
7.011
GRAVY (calculated)
-0.095
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: VLDSQVGWLL GKNGSVIKQM STDSCCEIRV SKDKLPLCAL PRDELCQITG ELDSVRKGLN TVAQLLFTHP PKESDVLGAH NSGSSRSFFN QPDVLPPGMQ
101: PNLHLPFQGP NVAHLPNFPE ALMHGHGSVP PEPLTFRLLC SSDKVGGIIG KGGNNIKSIQ NDTGCEIKVL DTVPKSEDRI VFISGPAHPG DGISPAQNAI
201: LHVQRKIVPT SNTKEGPAIC RLIVSPNQVG CLLGKGGSII AEMRKLSGAH IIVLSKDKIP KGVPENDEVV QISGASEAIQ EALMQITARL RNHLFRDRMA
301: STVPNVQPPF GLVDPQFGSY AGNHDSISPR IFPNVPQFHK DFIGRPLDEM SAPWTMKGMQ VVGDPISLPD IPGMAHRGMG GFPGPGQPSI VSTITADVMV
401: PKLVLPSLCG EDGGCLNRIR EFSGAKITVA DPMGNAMDTA ILISGTPDQM HAARSLIQAF VLSEPLAP
101: PNLHLPFQGP NVAHLPNFPE ALMHGHGSVP PEPLTFRLLC SSDKVGGIIG KGGNNIKSIQ NDTGCEIKVL DTVPKSEDRI VFISGPAHPG DGISPAQNAI
201: LHVQRKIVPT SNTKEGPAIC RLIVSPNQVG CLLGKGGSII AEMRKLSGAH IIVLSKDKIP KGVPENDEVV QISGASEAIQ EALMQITARL RNHLFRDRMA
301: STVPNVQPPF GLVDPQFGSY AGNHDSISPR IFPNVPQFHK DFIGRPLDEM SAPWTMKGMQ VVGDPISLPD IPGMAHRGMG GFPGPGQPSI VSTITADVMV
401: PKLVLPSLCG EDGGCLNRIR EFSGAKITVA DPMGNAMDTA ILISGTPDQM HAARSLIQAF VLSEPLAP
001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
Arabidopsis Description
At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.