Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009014_P004 | Maize | nucleus | 87.43 | 88.79 |
| Os01t0235800-01 | Rice | cytosol | 46.51 | 71.15 |
| TraesCS3B01G189700.1 | Wheat | nucleus | 66.34 | 67.09 |
| TraesCS3D01G166400.1 | Wheat | cytosol, mitochondrion, nucleus | 65.64 | 66.67 |
| TraesCS3A01G158700.1 | Wheat | nucleus | 65.5 | 66.52 |
| HORVU3Hr1G057270.16 | Barley | plastid | 65.36 | 60.31 |
| GSMUA_Achr10P... | Banana | cytosol | 43.44 | 46.98 |
| GSMUA_Achr6P13890_001 | Banana | cytosol | 42.88 | 46.87 |
| VIT_18s0001g08280.t01 | Wine grape | cytosol | 42.6 | 43.51 |
| KRH62129 | Soybean | plastid | 39.53 | 41.74 |
| KRH52837 | Soybean | plastid | 39.39 | 41.72 |
| PGSC0003DMT400012623 | Potato | nucleus, plastid | 37.85 | 40.15 |
| Solyc04g077060.2.1 | Tomato | nucleus | 26.4 | 39.96 |
| KXG39277 | Sorghum | nucleus | 21.23 | 28.04 |
| KXG35952 | Sorghum | plastid | 22.07 | 25.4 |
| OQU80050 | Sorghum | nucleus | 21.79 | 24.8 |
| KXG38256 | Sorghum | nucleus | 24.16 | 21.62 |
| OQU88922 | Sorghum | nucleus, peroxisome, plastid | 18.58 | 20.65 |
| KXG20038 | Sorghum | nucleus | 18.85 | 20.21 |
| EES16283 | Sorghum | cytosol | 14.25 | 20.04 |
| EER94472 | Sorghum | cytosol | 12.01 | 19.03 |
| OQU91315 | Sorghum | plastid | 11.45 | 16.87 |
| KXG29352 | Sorghum | cytosol | 11.59 | 16.09 |
| EER94248 | Sorghum | nucleus | 12.71 | 15.48 |
Protein Annotations
| Gene3D:3.30.1370.10 | MapMan:35.1 | EntrezGene:8078086 | UniProt:C5XJK0 | ncoils:Coil | EnsemblPlants:EES02175 |
| ProteinID:EES02175 | ProteinID:EES02175.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 | PFscan:PS50084 |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF148 | SMART:SM00322 | EnsemblPlantsGene:SORBI_3003G004300 | SUPFAM:SSF54791 | unigene:Sbi.5510 |
| UniParc:UPI0001A84D83 | RefSeq:XP_002457055.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:415543..419828
Molecular Weight (calculated)
77137.5 Da
IEP (calculated)
5.827
GRAVY (calculated)
-0.444
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRMTPSKR PFQKNSSDYN GRGKWQKTKH SSPHKSQFKI EPGVPFFRIL CPASKSGNVI GKGGAIIAKI REETRMRIRV DRAAPGCDER VIFITAVDKD
101: EEASSERGVE NDRGVAASTG AGHDRDGDNS KEGNDDPEGN NSKEQNDDSE KGNGKEEEDG LEKDHSTEEK DDSEKDHIRE EKDHSEKEHD KEEKDDPFVA
201: KVAESEPERV IPSALKAISL VFDRIFAAGD NNETGNASAA STPVSLRLLV LYSQAGWLLG KGGSVIKQMS ADNGCEIRVL RDNLPSCALL NDKLCQITGE
301: IDSVRKGLNA VSELLLAHPP KETDAVSGVH SSGSSSRSLF NQSDGLPSGM QSNFHIPLQG PSQANGPFDI IDLQPPIHGH ASVPIESLSF RMLCPQDKVG
401: SIIGKGGNIV KTIQKDTGCE IKVLDTVPKS EDRIISISGP AHPSDGISPA QNAILHVQRK IMLPTSDKKE GPAICRLIVS ANQVGCVLGK GGSIIAEMRK
501: LSGAFIIVLS KDKIPRGVPE HDEVVQISGS CEAIQEALMQ ITARLRNHLF RVDRMPAMGP NMRPPFGLLD SQFGPFAGNH ESPSLFHKDF MGRPLDGISA
601: PWTVKGMRDL SDPLSISDIP GAGHREAGGF SGPGQPSMMP NLTAEVLVPR LIIPALCSED GGCLDRIREF SEAKITVAEP IADAMDIPVL ISGTPDQMHA
701: ARSLVQAFVM SESFAP
101: EEASSERGVE NDRGVAASTG AGHDRDGDNS KEGNDDPEGN NSKEQNDDSE KGNGKEEEDG LEKDHSTEEK DDSEKDHIRE EKDHSEKEHD KEEKDDPFVA
201: KVAESEPERV IPSALKAISL VFDRIFAAGD NNETGNASAA STPVSLRLLV LYSQAGWLLG KGGSVIKQMS ADNGCEIRVL RDNLPSCALL NDKLCQITGE
301: IDSVRKGLNA VSELLLAHPP KETDAVSGVH SSGSSSRSLF NQSDGLPSGM QSNFHIPLQG PSQANGPFDI IDLQPPIHGH ASVPIESLSF RMLCPQDKVG
401: SIIGKGGNIV KTIQKDTGCE IKVLDTVPKS EDRIISISGP AHPSDGISPA QNAILHVQRK IMLPTSDKKE GPAICRLIVS ANQVGCVLGK GGSIIAEMRK
501: LSGAFIIVLS KDKIPRGVPE HDEVVQISGS CEAIQEALMQ ITARLRNHLF RVDRMPAMGP NMRPPFGLLD SQFGPFAGNH ESPSLFHKDF MGRPLDGISA
601: PWTVKGMRDL SDPLSISDIP GAGHREAGGF SGPGQPSMMP NLTAEVLVPR LIIPALCSED GGCLDRIREF SEAKITVAEP IADAMDIPVL ISGTPDQMHA
701: ARSLVQAFVM SESFAP
001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
Arabidopsis Description
At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.