CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030968_P006	Maize	extracellular	91.16	91.34
TraesCS5D01G071000.1	Wheat	nucleus	71.91	70.52
TraesCS5B01G066800.1	Wheat	nucleus	71.91	70.38
TraesCS5A01G059500.1	Wheat	cytosol	71.51	70.0
GSMUA_Achr7P01590_001	Banana	nucleus	54.42	62.95
GSMUA_Achr5P03200_001	Banana	cytosol	31.83	61.13
Bra001111.1-P	Field mustard	cytosol	44.01	57.44
Os12t0597600-01	Rice	cytosol	18.66	57.23
OQU91315	Sorghum	plastid	54.42	57.0
KRG97000	Soybean	nucleus	49.12	56.05
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	48.72	55.98
Solyc01g097010.2.1	Tomato	nucleus	39.29	55.1
Solyc06g084000.2.1	Tomato	nucleus	24.36	52.32
VIT_07s0141g00800.t01	Wine grape	cytosol	43.42	51.04
VIT_14s0081g00440.t01	Wine grape	cytosol	50.88	50.68
Solyc09g066120.2.1	Tomato	nucleus	44.99	46.54
PGSC0003DMT400051668	Potato	cytosol	46.76	46.48
PGSC0003DMT400051262	Potato	nucleus	45.78	46.41
CDY64706	Canola	nucleus	35.36	44.55
CDX74180	Canola	cytosol	48.72	44.05
CDY40663	Canola	cytosol	48.53	43.87
KRH67322	Soybean	nucleus	44.99	43.29
KRG95633	Soybean	nucleus	45.58	43.2
KRH71306	Soybean	nucleus	41.85	43.03
AT3G04610.2	Thale cress	cytosol	48.33	42.63
KRH32136	Soybean	cytosol	45.58	41.06
EER94472	Sorghum	cytosol	32.22	36.28
Solyc06g084010.2.1	Tomato	nucleus	19.45	30.65
EER94248	Sorghum	nucleus	31.43	27.21
KXG29352	Sorghum	cytosol	26.72	26.36
KXG39277	Sorghum	nucleus	20.43	19.19
OQU80050	Sorghum	nucleus	18.27	14.79
EES02175	Sorghum	nucleus, plastid	20.04	14.25
KXG20038	Sorghum	nucleus	17.49	13.32
OQU88922	Sorghum	nucleus, peroxisome, plastid	14.93	11.8
KXG35952	Sorghum	plastid	14.15	11.58
KXG38256	Sorghum	nucleus	18.07	11.5

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	UniProt:C5YR01	EnsemblPlants:EES16283	ProteinID:EES16283
ProteinID:EES16283.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612
InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288
PANTHER:PTHR10288:SF224	SMART:SM00322	EnsemblPlantsGene:SORBI_3008G153500	SUPFAM:SSF54791	UniParc:UPI0003C71EED	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:58572639..58578677

Molecular Weight (calculated)

54171.5 Da

IEP (calculated)

4.775

GRAVY (calculated)

-0.613

Length

509 amino acids

Sequence
(BLAST)

001: MDGPVDDPVE NNLTGGPSIL GNEEEANTYA DVQVKEEPEK LYDEESKDLM QDELGNQEHA NMNNEDVGGQ NKEDQATPTD HGVEAGVKQQ DATVPDDKKW
101: PGWPGESVFR ILVPTTKVGA VIGRKGDFIK KMCEESRARI KVLEGPPAVP ERVVMISAKD ELDTVLPPAV DGLLRVHKRI TDGLDGETDQ PQRATVTAGP
201: TRLLVPASQA GSLIGKQGAT IKSIQDASKC VLRIVENVPP VALNDDRVVE IQGEPLDAHK AVELIASHLR KFLVDRSVLP LFETQMKVHS VHREQPMPPP
301: QAWGPPPPSP WGHPPPNLPP PGGPGYGGNP QYMPPPPRPQ ESYYPPPDVP PVEKQPHYGI SSYGRDAPPS VPPGNQNQAH GSSQVTHSMQ VPLSYADAVI
401: GSAGASISYI RRHSGATISI QEGAPGEMTV EITGSASQVQ TAQQLIKNFM AEASPQGPPA PAPPAQPVDT GYSSYPPYGG ASYGSPPGAP APAPHNGGSY
501: GAYPPSYGY

Best Arabidopsis Sequence Match ( AT3G04610.4 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVDD QLEYHQYQLQ DQANEDVQDH SQDDLQYQPQ NQEQFQLQDE
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.