Factsheet for Bra001111.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74180	Canola	cytosol	100.0	69.27
CDY40663	Canola	cytosol	98.97	68.56
Solyc01g097010.2.1	Tomato	nucleus	61.03	65.56
AT3G04610.2	Thale cress	cytosol	94.87	64.12
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	71.28	62.75
KRG97000	Soybean	nucleus	71.54	62.56
VIT_14s0081g00440.t01	Wine grape	cytosol	73.85	56.36
GSMUA_Achr5P03200_001	Banana	cytosol	37.44	55.09
GSMUA_Achr7P01590_001	Banana	nucleus	60.77	53.86
Os03t0627500-01	Rice	cytosol	58.97	45.1
TraesCS4B01G069700.1	Wheat	nucleus	57.69	44.03
EES16283	Sorghum	cytosol	57.44	44.01
TraesCS4D01G068400.1	Wheat	nucleus	57.18	43.39
Zm00001d030968_P006	Maize	extracellular	56.41	43.31
TraesCS5D01G071000.1	Wheat	nucleus	56.67	42.58
TraesCS5B01G066800.1	Wheat	nucleus	56.67	42.5
TraesCS5A01G059500.1	Wheat	cytosol	56.41	42.31
TraesCS4A01G245800.1	Wheat	nucleus	56.92	42.29
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	57.44	41.33
OQU91315	Sorghum	plastid	46.15	37.04
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	57.18	33.94
Bra019133.1-P	Field mustard	cytosol	33.59	32.91
HORVU1Hr1G036300.1	Barley	cytosol	12.82	27.47
Bra013940.1-P	Field mustard	cytosol	29.74	27.29
Zm00001d003290_P002	Maize	mitochondrion	14.87	25.33
EER94248	Sorghum	nucleus	36.41	24.15
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	34.62	22.54
TraesCS1D01G134700.1	Wheat	cytosol	34.62	22.5
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	34.36	22.37
Zm00001d014180_P004	Maize	cytosol	35.38	21.33
HORVU1Hr1G036280.1	Barley	cytosol	22.05	20.98
Os10t0414700-01	Rice	nucleus	32.56	20.39
Os12t0597600-01	Rice	cytosol	8.21	19.28
Bra019674.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	19.23	18.34
Bra008709.1-P	Field mustard	nucleus	22.82	17.21
Zm00001d010815_P001	Maize	mitochondrion	15.13	16.86
Bra026852.1-P	Field mustard	nucleus	20.51	16.49
Bra013302.1-P	Field mustard	nucleus	24.36	16.21
Bra025032.1-P	Field mustard	nucleus	25.38	15.33
Bra024789.1-P	Field mustard	cytosol	14.62	15.16
Bra006294.1-P	Field mustard	nucleus	22.31	14.5
Bra014290.1-P	Field mustard	plastid	19.23	12.91
Bra003085.1-P	Field mustard	nucleus	18.72	11.42
Bra022624.1-P	Field mustard	nucleus	18.21	10.74
Bra030226.1-P	Field mustard	plastid	15.9	10.0
Bra038508.1-P	Field mustard	cytosol, plastid	15.9	9.7
Bra024292.1-P	Field mustard	nucleus	19.49	8.87

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EnsemblPlantsGene:Bra001111	EnsemblPlants:Bra001111.1	EnsemblPlants:Bra001111.1-P
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150
GO:GO:0009791	GO:GO:0009908	GO:GO:0009911	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1
InterPro:KH_dom_type_1_sf	UniProt:M4CA82	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF224
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI000254095B	SEG:seg	:	:

Description

AT3G04610 (E=1e-179) FLK | FLK (flowering locus KH domain); RNA binding / nucleic acid binding

Coordinates

chrA03:+:14806599..14809478

Molecular Weight (calculated)

41617.6 Da

IEP (calculated)

6.923

GRAVY (calculated)

-0.422

Length

390 amino acids

Sequence
(BLAST)

001: MLVPAQKVGS IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPTKVSTR LLVPASQAGS
101: LIGKQGATVK AIQEAAGCIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHK SLELIASHLR KFLVDRSIIP YFESQMQKPT RQMDHMPPPH QAWGPPQGHP
201: PSGGGGPGYG HNPPPYMQQQ PPRHDSYYPP PEMRQPPMEK QPHQGISAYG REPPMNVHVS AAPPMAAQQV TQQLQIQLSY ADAVIGTSGS NISYTRRLSG
301: ATVTIQETRG VPGEMTVEVS GTGSQVQTAI QLIQNFMAEA GAPAPAQPQT VVAPEQQGYN PYATHGSVYA AAPTNPPGGY ATDYSSGYGY

Best Arabidopsis Sequence Match ( AT3G04610.4 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVDD QLEYHQYQLQ DQANEDVQDH SQDDLQYQPQ NQEQFQLQDE
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.