CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	85.39	63.17
TraesCS4B01G069700.1	Wheat	nucleus	66.05	62.82
TraesCS4D01G068400.1	Wheat	nucleus	65.43	61.87
Os03t0627500-01	Rice	cytosol	63.37	60.39
TraesCS4A01G245800.1	Wheat	nucleus	65.23	60.38
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	63.79	57.2
EES16283	Sorghum	cytosol	57.0	54.42
GSMUA_Achr7P01590_001	Banana	nucleus	46.91	51.82
Bra001111.1-P	Field mustard	cytosol	37.04	46.15
KRG97000	Soybean	nucleus	41.98	45.74
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	41.36	45.37
CDY64706	Canola	nucleus	37.04	44.55
VIT_14s0081g00440.t01	Wine grape	cytosol	46.5	44.23
VIT_07s0141g00800.t01	Wine grape	cytosol	39.3	44.11
GSMUA_Achr5P03200_001	Banana	cytosol	23.25	42.64
Solyc01g097010.2.1	Tomato	nucleus	31.48	42.15
KRH71306	Soybean	nucleus	41.56	40.81
PGSC0003DMT400051668	Potato	cytosol	41.36	39.26
Solyc09g066120.2.1	Tomato	nucleus	39.51	39.02
PGSC0003DMT400051262	Potato	nucleus	40.12	38.84
KRH67322	Soybean	nucleus	41.36	38.0
KRG95633	Soybean	nucleus	41.98	37.99
CDX74180	Canola	cytosol	41.15	35.52
AT3G04610.2	Thale cress	cytosol	41.77	35.18
CDY40663	Canola	cytosol	40.53	34.99
KRH32136	Soybean	cytosol	40.33	34.69
Solyc06g084010.2.1	Tomato	nucleus	22.22	33.44
Solyc06g084000.2.1	Tomato	nucleus	16.05	32.91
EER94472	Sorghum	cytosol	28.4	30.53
KXG29352	Sorghum	cytosol	25.72	24.22
EER94248	Sorghum	nucleus	27.98	23.13
KXG39277	Sorghum	nucleus	16.87	15.13
EES02175	Sorghum	nucleus, plastid	16.87	11.45
KXG20038	Sorghum	nucleus	15.43	11.23
OQU80050	Sorghum	nucleus	13.79	10.65
KXG38256	Sorghum	nucleus	15.23	9.25
OQU88922	Sorghum	nucleus, peroxisome, plastid	11.11	8.39
KXG35952	Sorghum	plastid	10.49	8.2

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	UniProt:A0A1Z5S6E7	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
EnsemblPlants:OQU91315	ProteinID:OQU91315	ProteinID:OQU91315.1	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288
PANTHER:PTHR10288:SF155	SMART:SM00322	EnsemblPlantsGene:SORBI_3001G162300	SUPFAM:SSF54791	UniParc:UPI000B8BA2D8	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:13383509..13389815

Molecular Weight (calculated)

52623.4 Da

IEP (calculated)

5.020

GRAVY (calculated)

-0.701

Length

486 amino acids

Sequence
(BLAST)

001: TPIHLSDSGL HERSTPHTNQ PCRPRSPALP SFRRQFLAGV VPSPPLPPPS PQDSELMDEQ VENFVGHDKG GLAQVPYDGE QPNPYDDVAK QYSEELGDQY
101: NEQPGAQYDE GSANPYNEEQ ANVYNEETGN QYNEDPTNSY QEELENAFSG DPDMAQKDNS QVNNVDDDKW PGWPGESVFR ILVPAQKVGA IIGRKGEFIK
201: KMCEETKARI KILDGPPGVP ERAVMISAKD EPDAPLSPAV DGLLRVHKRI TDSSNGESGQ LQRSAGNIGP TRLLVPSSQA GSLIGKQGAT IKSIQDSSKS
301: VVRIVENVPP VALNDDRVVE IQGEPLGVQK AVELIASHLR KFLVDRSVLP LFETHMKMHG MPREQPVPPP QHWGPPQTWG PPPNIPPGGP GFGGNPQFIP
401: PRPQDSYYPT PDAPAMEKQP HYGISAYGRE APPSGASATG NQPLSHAGSQ VTHNMHIPLN YADAVIGAAG ASISYIRRHS GATVTI

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.