CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, cytoskeleton

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97000	Soybean	nucleus	97.07	96.41
Solyc01g097010.2.1	Tomato	nucleus	59.59	72.73
Bra001111.1-P	Field mustard	cytosol	62.75	71.28
VIT_14s0081g00440.t01	Wine grape	cytosol	76.98	66.73
GSMUA_Achr7P01590_001	Banana	nucleus	61.17	61.59
GSMUA_Achr5P03200_001	Banana	cytosol	36.12	60.38
CDX74180	Canola	cytosol	67.49	53.11
CDY40663	Canola	cytosol	67.04	52.75
AT3G04610.2	Thale cress	cytosol	68.4	52.51
CDY64706	Canola	nucleus	46.73	51.24
Os03t0627500-01	Rice	cytosol	57.11	49.61
TraesCS4B01G069700.1	Wheat	nucleus	56.43	48.92
EES16283	Sorghum	cytosol	55.98	48.72
TraesCS4D01G068400.1	Wheat	nucleus	55.98	48.25
KRG95633	Soybean	nucleus	58.47	48.23
TraesCS5D01G071000.1	Wheat	nucleus	56.43	48.17
TraesCS5B01G066800.1	Wheat	nucleus	56.43	48.08
Zm00001d030968_P006	Maize	extracellular	55.08	48.03
KRH67322	Soybean	nucleus	57.34	48.02
TraesCS5A01G059500.1	Wheat	cytosol	56.21	47.88
TraesCS4A01G245800.1	Wheat	nucleus	55.53	46.86
KRH32136	Soybean	cytosol	58.69	46.02
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	55.98	45.76
KRH71306	Soybean	nucleus	51.02	45.66
OQU91315	Sorghum	plastid	45.37	41.36
KRH19104	Soybean	nucleus	38.37	38.99
KRH02776	Soybean	nucleus	38.37	38.99
KRH12329	Soybean	cytosol, nucleus	38.15	38.24
KRH37335	Soybean	cytosol, nucleus	37.7	37.7
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	55.53	37.44
HORVU1Hr1G036300.1	Barley	cytosol	14.45	35.16
Os12t0597600-01	Rice	cytosol	11.96	31.93
EER94248	Sorghum	nucleus	40.86	30.78
KRH58152	Soybean	cytosol	8.58	29.92
Zm00001d003290_P002	Maize	mitochondrion	15.35	29.69
TraesCS1D01G134700.1	Wheat	cytosol	38.15	28.17
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	37.92	28.05
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	37.7	27.88
Zm00001d014180_P004	Maize	cytosol	39.5	27.05
Os10t0414700-01	Rice	nucleus	37.25	26.48
HORVU1Hr1G036280.1	Barley	cytosol	23.25	25.12
KRH00973	Soybean	nucleus, plastid	18.06	22.1
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	18.28	20.88
Zm00001d010815_P001	Maize	mitochondrion	16.48	20.86
KRH18467	Soybean	nucleus	23.93	19.34
KRH01196	Soybean	nucleus	23.48	19.15
KRH40065	Soybean	nucleus	23.02	18.89
KRG93559	Soybean	nucleus	23.25	18.8
KRH58669	Soybean	endoplasmic reticulum, nucleus	21.67	15.46
KRH42565	Soybean	nucleus	21.22	15.04
KRH49838	Soybean	plastid	19.64	14.75
KRH53532	Soybean	nucleus	21.44	14.68
KRH42077	Soybean	plastid	18.96	14.31
KRH64403	Soybean	nucleus	20.32	13.98
KRH44614	Soybean	mitochondrion, nucleus	16.25	12.74
KRH21739	Soybean	plastid	20.09	12.45
KRH39475	Soybean	plastid	17.16	12.44
KRH74462	Soybean	nucleus	16.93	12.18
KRH62129	Soybean	plastid	18.51	12.09
KRH10613	Soybean	plastid	19.64	11.97
KRH47290	Soybean	mitochondrion, nucleus	14.67	11.63
KRH52837	Soybean	plastid	17.38	11.39

Protein Annotations

EntrezGene:100793728	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:ACUP02002123	EnsemblPlantsGene:GLYMA_03G248200
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1JRP0	InterPro:IPR036612
InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH68752	ProteinID:KRH68752	ProteinID:KRH68752.1
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF224	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI000233A4C4	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:44469905..44477599

Molecular Weight (calculated)

46539.1 Da

IEP (calculated)

5.868

GRAVY (calculated)

-0.255

Length

443 amino acids

Sequence
(BLAST)

001: MAEMDQNTGG EHEAEETIEI EAEVHGGEEA VVAEKKWPGW PGESVFRMLV PAQKVGGIIG RKGEFIKKIV EETRARVKIL DGPPGTVQRA VMISAKEEPG
101: SSVPPAVDGL LRIHKRIIDG LESDFTHAPS GVAGKVSTKL LVPASQAGSL IGKQGGTVKS IQEASNCIVR VLGAEDLPIF ALQDDRVVEV VGDPAGVHKA
201: LELIASHLRK FLVDRGVIPI FEMNMQTANP HHAEHMPPHQ SWGPSQGLPP NVGGGPGFGP PSQYMPPPRQ LDSYYPSAEM PPPVDRQPHQ GISAYGRDAS
301: IGVHASSNTQ SAPSIVTQIT QQMQIPLSYA DAVIGTAGAS ISYIRRASGA TVTIQEARGV PGEMTVEISG TASQVQTAQQ LIQNFMAEAA AAAAAPAQPQ
401: TTVPAADQGY NSYPAHGSVY ASPPSNPGHA GGYGSVYGAN YGY

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.