CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10613	Soybean	plastid	89.37	87.9
KRH49838	Soybean	plastid	57.34	69.49
KRH42077	Soybean	plastid	55.66	67.8
VIT_03s0038g00420.t01	Wine grape	plastid	56.08	61.88
Solyc01g106020.2.1	Tomato	plastid	46.01	50.93
PGSC0003DMT400083772	Potato	plastid	45.59	50.7
CDX84522	Canola	nucleus	44.62	43.05
KRH39475	Soybean	plastid	32.31	37.81
Bra024292.1-P	Field mustard	nucleus	45.31	37.81
AT5G64390.3	Thale cress	nucleus	45.31	37.41
KRH47290	Soybean	mitochondrion, nucleus	28.81	36.85
KRH44614	Soybean	mitochondrion, nucleus	27.55	34.87
KRH74462	Soybean	nucleus	29.51	34.25
KRH52837	Soybean	plastid	31.05	32.84
KRH62129	Soybean	plastid	30.49	32.15
KRG93559	Soybean	nucleus	24.2	31.57
KRH40065	Soybean	nucleus	23.64	31.3
KRH01196	Soybean	nucleus	23.36	30.76
KRH18467	Soybean	nucleus	23.36	30.47
AT5G09560.1	Thale cress	cytosol	24.62	29.33
KRH64403	Soybean	nucleus	25.73	28.57
KRH58152	Soybean	cytosol	5.03	28.35
KRH53532	Soybean	nucleus	25.45	28.13
KRH42565	Soybean	nucleus	24.2	27.68
KRH58669	Soybean	endoplasmic reticulum, nucleus	23.78	27.38
OQU88922	Sorghum	nucleus, peroxisome, plastid	22.8	25.31
Zm00001d019538_P002	Maize	plastid	22.66	24.0
Os07t0439100-01	Rice	cytosol	7.55	23.18
KRH00973	Soybean	nucleus, plastid	11.47	22.65
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	11.61	21.39
KRH02776	Soybean	nucleus	12.59	20.64
KRH19104	Soybean	nucleus	12.31	20.18
KRG97000	Soybean	nucleus	12.59	20.18
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	12.45	20.09
KRH37335	Soybean	cytosol, nucleus	12.31	19.86
KRH12329	Soybean	cytosol, nucleus	12.03	19.46
KRH67322	Soybean	nucleus	12.45	16.82
KRH71306	Soybean	nucleus	11.61	16.77
KRG95633	Soybean	nucleus	12.45	16.57
KRH32136	Soybean	cytosol	12.45	15.75

Protein Annotations

EntrezGene:100816819	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:ACUP02008363	EnsemblPlantsGene:GLYMA_13G256300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	UniProt:K7M1V8
InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH21739	ProteinID:KRH21739	ProteinID:KRH21739.1
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF173	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI000295842F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:36168925..36174908

Molecular Weight (calculated)

76424.3 Da

IEP (calculated)

8.592

GRAVY (calculated)

-0.169

Length

715 amino acids

Sequence
(BLAST)

001: MGSNFLSPPA KRSALDPNPF PPNGPSKRSR QSKPPPPLSV PPGHVAFRLL CNASRIGGVI GKSGSVIKTL QQSTGAKIRI EDAPQESPDR VILVIADAAL
101: SCKVLLRNEE VVEVSKAQEA LLKVFDRILE VAAEMEGVDV GDRVMSCRLV ADSAQAGSVI GKGGKVVERI KKETGCKIRV LTDDLPLCAS ASDEMIEIEG
201: RVSSVKKALV AVSQRLQDCP SVNRIKMMGN KPYEIVQYET LDALPREILT AAPRGTLTVV PHETVDHLLL RSSALSTLSS SSNSYATRVH SLSAEVNRVS
301: SLEPKALQQE VSFRILCSND RVGGVIGKGG NIVRALQSET GATISIGPLV AECEDRLITI AASENPESRY SPAQKAAVLV FSRSIEVGFE KELDSGLNKG
401: STVTVRLVVP SSQVGCLIGK GGVIVSEIRK ATGANIRIIG TDQVPKCASD NDQVVQISGE FSSVQDALYN ATGRLRDNLF VSTQNSAGTR SLSSLRVDTS
501: PYGIQQDFVP HGSQLPATTS HCLSRHTFAQ GIDHLGLSRN LDHPSSPGLW TRNLDRTSSP LLWTRNLDCP SSPGLWTRNL DRPSSPGLWT RKLDRPSSPG
601: LWTQPTVAGI NSRSINDFSL GLTSRKGGLE LVSSGSKSAI VTNTTVEIVV PDDTIDCVYG ENGRNLVRLR QISGAKVVIH EPRPGTSDRI IVISGTPDET
701: QAAQSLLQAF ILSGS

Best Arabidopsis Sequence Match ( AT5G64390.1 )
(BLAST)

001: MERNSVKFHA EKRSGAFDPG SGFGSSKRVK THHTQLLSAL VVPVGHAAFR LLCPLSHVGA VIGKSGNVIK QLQQSTGAKI RVEEPPSGSP DRVITIIAQA
101: DSKSRVKLGA NNNGNAEGEK KEEEVEVSKA QGALIKVFEL LAAEADSDTV VCRLLTESSH AGAVIGKGGQ MVGSIRKETG CKISIRIENL PICADTDDEM
201: VEVEGNAIAV KKALVSISRC LQNCQSIDKV RMVGNRPLEK EFQASLHRPI ETIIQESLPR SVEVNPYDYR LRNDEIFPRG TVARANDVIP HDTLHLRRIE
301: AVPQGALRMH IEADRQDVLR RHVEADRQDA LRRRIDVVPQ ETLYMPSDVL RGDCFRQHRE RDDSHDSLHR PFEMVPRDAM GMPFESFPRD AYGRPIETMT
401: QETLRGQSAD YLAHRYSTLD THPHSFTTSA SMANTATMKP PPSEVEVGNQ DVVFKILCST ENAGGVIGTG GKVVRMLHSE TGAFINVGNT LDDCEERLIA
501: VTASENPECQ SSPAQKAIML IFSRLFELAT NKILDNGPRS SITARLVVPT SQIGCVLGKG GVIVSEMRKT TGAAIQILKV EQNPKCISEN DQVVQITGEF
601: PNVREAIFHI TSRLRDSVFS NSMKNSLAKS SSALTTERFY DRQSDNPLSI GSHQSVSNPA TNSSSLHRRS EDSFLSGSHS SVNYSRSVGT DPYIRPEDPF
701: PDRFNPSAGY SHNFGRRFTM DHSDNSHHLT EAPSRLWASP PPAAPRGLSD ASGGLSSARA GHVLGSGHKS AIVTNTTVEI RVPANAMSFV YGEQGYNLEQ
801: LRQISGARVI IHEPPLGTSD RIIVISGTPD QTQAAQNLLH AFILTGETSL SKKYNLN

Arabidopsis Description

HEN4RNA-binding KH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4KDM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.