Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024292.1-P | Field mustard | nucleus | 97.44 | 84.25 |
| AT5G64390.3 | Thale cress | nucleus | 79.89 | 68.36 |
| VIT_03s0038g00420.t01 | Wine grape | plastid | 41.84 | 47.84 |
| KRH49838 | Soybean | plastid | 36.57 | 45.93 |
| KRH42077 | Soybean | plastid | 35.9 | 45.32 |
| KRH21739 | Soybean | plastid | 43.05 | 44.62 |
| PGSC0003DMT400083772 | Potato | plastid | 37.25 | 42.92 |
| Solyc01g106020.2.1 | Tomato | plastid | 36.71 | 42.11 |
| KRH10613 | Soybean | plastid | 40.76 | 41.54 |
| CDX99470 | Canola | nucleus | 11.47 | 31.37 |
| CDX99471 | Canola | nucleus | 8.77 | 30.23 |
| CDY46555 | Canola | plastid | 22.81 | 29.09 |
| CDY13742 | Canola | mitochondrion | 24.56 | 29.07 |
| CDY52947 | Canola | plastid | 22.4 | 28.82 |
| CDX78846 | Canola | nucleus | 22.27 | 28.75 |
| CDX76904 | Canola | mitochondrion, nucleus, peroxisome, plastid | 24.29 | 28.53 |
| CDY49107 | Canola | nucleus | 18.08 | 28.21 |
| CDY25609 | Canola | cytosol | 23.35 | 27.86 |
| CDY60930 | Canola | nucleus | 19.97 | 27.82 |
| CDX89490 | Canola | cytosol | 23.21 | 27.79 |
| CDY39336 | Canola | mitochondrion | 17.68 | 27.7 |
| CDX69536 | Canola | nucleus | 19.84 | 27.63 |
| CDY33769 | Canola | nucleus | 18.08 | 27.63 |
| CDX81615 | Canola | cytosol | 17.0 | 27.45 |
| CDY03018 | Canola | nucleus | 17.27 | 27.35 |
| CDX77643 | Canola | nucleus | 23.21 | 26.92 |
| CDY33460 | Canola | nucleus | 23.21 | 26.83 |
| Os07t0439100-01 | Rice | cytosol | 8.37 | 26.61 |
| CDY45180 | Canola | cytosol | 15.11 | 26.48 |
| CDY56908 | Canola | nucleus | 22.4 | 26.1 |
| CDX96185 | Canola | nucleus | 22.4 | 25.9 |
| CDX70604 | Canola | nucleus | 20.11 | 25.69 |
| CDY49453 | Canola | nucleus | 22.13 | 25.55 |
| CDY51849 | Canola | cytosol | 3.64 | 25.47 |
| CDY27030 | Canola | nucleus | 22.67 | 25.26 |
| CDX78623 | Canola | nucleus | 20.24 | 25.0 |
| OQU88922 | Sorghum | nucleus, peroxisome, plastid | 21.46 | 24.69 |
| Zm00001d019538_P002 | Maize | plastid | 20.65 | 22.67 |
| CDX89376 | Canola | cytosol | 10.39 | 18.12 |
| CDY42768 | Canola | cytosol | 11.61 | 17.44 |
| CDY65294 | Canola | cytosol | 10.26 | 17.31 |
| CDX92741 | Canola | cytosol | 11.47 | 17.24 |
| CDY49999 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.8 | 16.67 |
| CDY64706 | Canola | nucleus | 8.77 | 16.09 |
| CDY40663 | Canola | cytosol | 10.93 | 14.39 |
| CDX74180 | Canola | cytosol | 10.8 | 14.21 |
Protein Annotations
| Gene3D:3.30.1370.10 | Gene3D:3.30.310.210 | MapMan:35.1 | GO:A0A078D5W1 | EnsemblPlants:CDX84522 | ProteinID:CDX84522 |
| ProteinID:CDX84522.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0010093 | EnsemblPlantsGene:GSBRNA2T00141758001 |
| InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 | PFscan:PS50084 |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF173 | SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI0004EF0BA4 | SEG:seg |
Description
BnaC03g49780DKH domain-containing protein HEN4 [Source:Projected from Arabidopsis thaliana (AT5G64390) UniProtKB/Swiss-Prot;Acc:F4KDN0]
Coordinates
chrLK031837:+:1600719..1605795
Molecular Weight (calculated)
80015.0 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.363
Length
741 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNSFHYST EKRSRAVDPG SGFGSSKRAK THHAQLLSPL VVPVGHASFR LLSPISQVGA VIGKSGSVIK QLQQSTGAKI RVEEPPVGSP DRVITIIAQV
101: DSSSRVKLGV DSNGNTEAER KEEDEVEVSK AQAAVIRVFE ILAAEADSST VVCRLLTESS HAGAVIGKGG QMVGRIRKET GCKIAIRTEN LPICADCDDE
201: MVEIEGNVNA VKKALVSVSR CLQDCQDVKK IRTVGNRPLE KETIQESSHR PLETIIQESL LPERHDALRR HIDLGPREVL YRPSDETLRR PSGDFLAHRS
301: STLDTHPHSI TTSALMSNAV TLKPHQAEVE AENQDVVFKI LCSIENAGGV IGTGGKVIRT LHSESGAFIS VGNTIADCEE RLITVTAPES PQRQSSPAQK
401: AILLVFTRLF ELATKKIVDN GSRMSITARL VVPTSQIGCL LGKGGAVVSE MRKATGAAIQ ILKAEQNPKC ISENDQVVQI TGEFPNVREA IFHVTSRLRD
501: SLFSKSMKSS VTKSNSTLTT ERIHRGQSDN PPSVGSHQSF GHPPTISTSL NRRSDDSFLS GSQLSANYLR PAGTDPYTRP EDPVPDRFNP SGGYSPNFGR
601: RSTMDHNGIS HHLTETASRM WASPPPAALR GLSDASGGLS SARPGHVLGS GHKSAIVTNT TVEIRVPENA MSFVYGEHGN NLEQLRQISG ARVIVHEPQL
701: GTSDRIIVIS GTPDQTQSAQ NLLHAFILKG ETSLSKRCNL N
101: DSSSRVKLGV DSNGNTEAER KEEDEVEVSK AQAAVIRVFE ILAAEADSST VVCRLLTESS HAGAVIGKGG QMVGRIRKET GCKIAIRTEN LPICADCDDE
201: MVEIEGNVNA VKKALVSVSR CLQDCQDVKK IRTVGNRPLE KETIQESSHR PLETIIQESL LPERHDALRR HIDLGPREVL YRPSDETLRR PSGDFLAHRS
301: STLDTHPHSI TTSALMSNAV TLKPHQAEVE AENQDVVFKI LCSIENAGGV IGTGGKVIRT LHSESGAFIS VGNTIADCEE RLITVTAPES PQRQSSPAQK
401: AILLVFTRLF ELATKKIVDN GSRMSITARL VVPTSQIGCL LGKGGAVVSE MRKATGAAIQ ILKAEQNPKC ISENDQVVQI TGEFPNVREA IFHVTSRLRD
501: SLFSKSMKSS VTKSNSTLTT ERIHRGQSDN PPSVGSHQSF GHPPTISTSL NRRSDDSFLS GSQLSANYLR PAGTDPYTRP EDPVPDRFNP SGGYSPNFGR
601: RSTMDHNGIS HHLTETASRM WASPPPAALR GLSDASGGLS SARPGHVLGS GHKSAIVTNT TVEIRVPENA MSFVYGEHGN NLEQLRQISG ARVIVHEPQL
701: GTSDRIIVIS GTPDQTQSAQ NLLHAFILKG ETSLSKRCNL N
001: MERNSVKFHA EKRSGAFDPG SGFGSSKRVK THHTQLLSAL VVPVGHAAFR LLCPLSHVGA VIGKSGNVIK QLQQSTGAKI RVEEPPSGSP DRVITIIAQA
101: DSKSRVKLGA NNNGNAEGEK KEEEVEVSKA QGALIKVFEL LAAEADSDTV VCRLLTESSH AGAVIGKGGQ MVGSIRKETG CKISIRIENL PICADTDDEM
201: VEVEGNAIAV KKALVSISRC LQNCQSIDKV RMVGNRPLEK EFQASLHRPI ETIIQESLPR SVEVNPYDYR LRNDEIFPRG TVARANDVIP HDTLHLRRIE
301: AVPQGALRMH IEADRQDVLR RHVEADRQDA LRRRIDVVPQ ETLYMPSDVL RGDCFRQHRE RDDSHDSLHR PFEMVPRDAM GMPFESFPRD AYGRPIETMT
401: QETLRGQSAD YLAHRYSTLD THPHSFTTSA SMANTATMKP PPSEVEVGNQ DVVFKILCST ENAGGVIGTG GKVVRMLHSE TGAFINVGNT LDDCEERLIA
501: VTASENPECQ SSPAQKAIML IFSRLFELAT NKILDNGPRS SITARLVVPT SQIGCVLGKG GVIVSEMRKT TGAAIQILKV EQNPKCISEN DQVVQITGEF
601: PNVREAIFHI TSRLRDSVFS NSMKNSLAKS SSALTTERFY DRQSDNPLSI GSHQSVSNPA TNSSSLHRRS EDSFLSGSHS SVNYSRSVGT DPYIRPEDPF
701: PDRFNPSAGY SHNFGRRFTM DHSDNSHHLT EAPSRLWASP PPAAPRGLSD ASGGLSSARA GHVLGSLHAR LVFSSGHKSA IVTNTTVEIR VPANAMSFVY
801: GEQGYNLEQL RQISGARVII HEPPLGTSDR IIVISGTPDQ TQAAQNLLHA FILTGETSLS KKYNLN
101: DSKSRVKLGA NNNGNAEGEK KEEEVEVSKA QGALIKVFEL LAAEADSDTV VCRLLTESSH AGAVIGKGGQ MVGSIRKETG CKISIRIENL PICADTDDEM
201: VEVEGNAIAV KKALVSISRC LQNCQSIDKV RMVGNRPLEK EFQASLHRPI ETIIQESLPR SVEVNPYDYR LRNDEIFPRG TVARANDVIP HDTLHLRRIE
301: AVPQGALRMH IEADRQDVLR RHVEADRQDA LRRRIDVVPQ ETLYMPSDVL RGDCFRQHRE RDDSHDSLHR PFEMVPRDAM GMPFESFPRD AYGRPIETMT
401: QETLRGQSAD YLAHRYSTLD THPHSFTTSA SMANTATMKP PPSEVEVGNQ DVVFKILCST ENAGGVIGTG GKVVRMLHSE TGAFINVGNT LDDCEERLIA
501: VTASENPECQ SSPAQKAIML IFSRLFELAT NKILDNGPRS SITARLVVPT SQIGCVLGKG GVIVSEMRKT TGAAIQILKV EQNPKCISEN DQVVQITGEF
601: PNVREAIFHI TSRLRDSVFS NSMKNSLAKS SSALTTERFY DRQSDNPLSI GSHQSVSNPA TNSSSLHRRS EDSFLSGSHS SVNYSRSVGT DPYIRPEDPF
701: PDRFNPSAGY SHNFGRRFTM DHSDNSHHLT EAPSRLWASP PPAAPRGLSD ASGGLSSARA GHVLGSLHAR LVFSSGHKSA IVTNTTVEIR VPANAMSFVY
801: GEQGYNLEQL RQISGARVII HEPPLGTSDR IIVISGTPDQ TQAAQNLLHA FILTGETSLS KKYNLN
Arabidopsis Description
HEN4RNA-binding KH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4KDM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.