CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026852.1-P	Field mustard	nucleus	100.0	100.0
CDX81615	Canola	cytosol	92.78	98.04
CDY49107	Canola	nucleus	88.04	89.89
CDY39336	Canola	mitochondrion	87.42	89.64
AT1G14170.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	88.04	89.14
CDY51849	Canola	cytosol	19.38	88.68
CDY03018	Canola	nucleus	70.31	72.86
CDY45180	Canola	cytosol	61.65	70.69
VIT_01s0026g02650.t01	Wine grape	nucleus	61.65	52.27
PGSC0003DMT400047374	Potato	nucleus	54.43	49.53
Solyc05g007810.2.1	Tomato	nucleus	54.23	49.44
GSMUA_Achr7P11520_001	Banana	mitochondrion, nucleus	52.99	48.49
Zm00001d029328_P002	Maize	nucleus	53.4	47.87
GSMUA_Achr6P10750_001	Banana	nucleus	52.37	47.74
Os03t0376800-02	Rice	nucleus	53.2	47.6
KXG39277	Sorghum	nucleus	52.78	47.23
CDY60930	Canola	nucleus	50.31	45.86
CDX69536	Canola	nucleus	49.69	45.3
TraesCS4A01G150800.1	Wheat	nucleus	49.9	44.9
TraesCS4B01G166500.2	Wheat	nucleus	49.9	42.98
TraesCS4D01G160700.2	Wheat	nucleus	49.69	42.81
CDX70604	Canola	nucleus	50.52	42.24
HORVU4Hr1G049680.1	Barley	nucleus	50.1	41.75
CDX78623	Canola	nucleus	50.52	40.83
CDX99471	Canola	nucleus	13.61	30.7
CDX78846	Canola	nucleus	27.42	23.17
CDX77643	Canola	nucleus	30.31	23.0
CDY33460	Canola	nucleus	30.1	22.78
CDX96185	Canola	nucleus	27.84	21.06
CDY27030	Canola	nucleus	28.87	21.05
CDY49453	Canola	nucleus	27.01	20.41
CDY56908	Canola	nucleus	26.6	20.28
CDY46555	Canola	plastid	23.51	19.62
CDY52947	Canola	plastid	22.89	19.27
CDX99470	Canola	nucleus	10.31	18.45
CDX84522	Canola	nucleus	27.63	18.08
CDY13742	Canola	mitochondrion	22.89	17.73
CDY25609	Canola	cytosol	22.68	17.71
CDX76904	Canola	mitochondrion, nucleus, peroxisome, plastid	22.89	17.59
CDX89490	Canola	cytosol	21.65	16.96
CDY64706	Canola	nucleus	14.02	16.83
CDX89376	Canola	cytosol	14.23	16.24
CDX92741	Canola	cytosol	16.49	16.23
CDY42768	Canola	cytosol	16.29	16.02
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	15.67	15.83
CDY40663	Canola	cytosol	18.35	15.81
CDX74180	Canola	cytosol	18.35	15.81
CDY65294	Canola	cytosol	14.02	15.49

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	GO:A0A078H8F7	UniProt:A0A078H8F7	EnsemblPlants:CDY33769
ProteinID:CDY33769	ProteinID:CDY33769.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
EnsemblPlantsGene:GSBRNA2T00055185001	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	PFAM:PF00013
PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF149	SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI0002542E12
SEG:seg	:	:	:	:	:

Description

BnaA09g45750DBnaA09g45750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8F7]

Coordinates

chrLK032321:+:259399..261922

Molecular Weight (calculated)

53308.1 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.433

Length

485 amino acids

Sequence
(BLAST)

001: MASTLRNIHG KRSNFQSEFP GNGGSKRRNL HDDDTDHNVI GSEDTVYRYL CPVKKTGSII GKGGEIAKQI RSETKSNMRI NEALPGCEER VVTIYSTSDE
101: LNHFGDDGEL VCPALDALFK VHDMVVADSN DNDDDDDGDE DLVGKQMVTV RMLVPSDQIG CVIGKGGQVI QKLRTETNAQ IRVIKDNLPP CALTLSHDEL
201: LQIIGEPLVV REALYQVASL LHDNPSRFQH SLLSSPSTMY QPGGMLMCAP LTSSHRNYTA RRDVADATEF CVCFICPAEN VGGVIGKGGG FINQIRQETG
301: ATIRVNTSET EEDDSIIFIS SKEFYEDQSP TVNAAIRLQE RCSEKVGKDT NDATISTRLL VSSSHIGCLI GKGGAVISEM RSVTRANIRI LQKENVPKIA
401: REDEEMVQIT GSPDAAMKAL TQVVLRLRAN AFDMNHGLVL LPTSFPYIPQ VSESSNRSKY AKRDGSRDQD YSKLSSNSKR RNHVS

Best Arabidopsis Sequence Match ( AT1G14170.3 )
(BLAST)

001: MASTLRNIHG KRSNLQSEFT GNGGSKRRNL HDETDQNVIA SEDTVYRYLC PVKKTGSIIG KGGEIAKQIR SETKSNMRIN EALPGCEERV VTMYSTNEEL
101: NHFGDDGELV CPALDALFKV HDMVVADADQ DDGTDDDNDL GEKQTVTVRM LVPSDQIGCV IGKGGQVIQN LRNDTNAQIR VIKDHLPACA LTLSHDELLL
201: IIGEPLVVRE ALYQVASLLH DNPSRFQHLL LSSSSSSMHQ PGAMLMSAAL TSSHRNYAVR RDIADAREFC VCFICPAENV GGVIGKGGGF INQIRQETGA
301: TIRVNTSETD DDDCIIFISS KEFYEDQSPA VNAAIRLQQR CSEKVGKDAN DLAISTRLLV SSSQIGCLIG KGGAVISEMR SVTRANIRIL QKEDVPKIAR
401: EDEEMVQITG SPDAAMKALT QVILRLRANS FDMDHGLVLL PTSFPYIPQV TESSSKSKYA KRDDHSKLNS NSKRRNHVS

Arabidopsis Description

F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.