Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39336 | Canola | mitochondrion | 98.11 | 21.99 |
| CDY49107 | Canola | nucleus | 97.17 | 21.68 |
| CDX81615 | Canola | cytosol | 88.68 | 20.48 |
| CDY33769 | Canola | nucleus | 88.68 | 19.38 |
| AT1G14170.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 82.08 | 18.16 |
| CDY45180 | Canola | cytosol | 68.87 | 17.26 |
| CDY03018 | Canola | nucleus | 66.98 | 15.17 |
| Bra019674.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 37.74 | 9.78 |
| KXG39277 | Sorghum | nucleus | 45.28 | 8.86 |
| Os03t0376800-02 | Rice | nucleus | 44.34 | 8.67 |
| VIT_01s0026g02650.t01 | Wine grape | nucleus | 46.23 | 8.57 |
| Zm00001d029328_P002 | Maize | nucleus | 43.4 | 8.5 |
| GSMUA_Achr7P11520_001 | Banana | mitochondrion, nucleus | 42.45 | 8.49 |
| CDY60930 | Canola | nucleus | 40.57 | 8.08 |
| Solyc05g007810.2.1 | Tomato | nucleus | 40.57 | 8.08 |
| CDX69536 | Canola | nucleus | 39.62 | 7.89 |
| PGSC0003DMT400047374 | Potato | nucleus | 39.62 | 7.88 |
| TraesCS4A01G150800.1 | Wheat | nucleus | 39.62 | 7.79 |
| TraesCS4D01G160700.2 | Wheat | nucleus | 40.57 | 7.64 |
| GSMUA_Achr6P10750_001 | Banana | nucleus | 37.74 | 7.52 |
| TraesCS4B01G166500.2 | Wheat | nucleus | 39.62 | 7.46 |
| CDX70604 | Canola | nucleus | 39.62 | 7.24 |
| HORVU4Hr1G049680.1 | Barley | nucleus | 38.68 | 7.04 |
| CDX78623 | Canola | nucleus | 39.62 | 7.0 |
| CDX99470 | Canola | nucleus | 16.98 | 6.64 |
| CDX77643 | Canola | nucleus | 24.53 | 4.07 |
| CDY33460 | Canola | nucleus | 24.53 | 4.06 |
| CDX84522 | Canola | nucleus | 25.47 | 3.64 |
| CDY27030 | Canola | nucleus | 22.64 | 3.61 |
| CDX96185 | Canola | nucleus | 21.7 | 3.59 |
| CDY56908 | Canola | nucleus | 20.75 | 3.46 |
| CDY49453 | Canola | nucleus | 20.75 | 3.43 |
| CDX78846 | Canola | nucleus | 16.98 | 3.14 |
| CDY52947 | Canola | plastid | 16.04 | 2.95 |
| CDY46555 | Canola | plastid | 16.04 | 2.93 |
| CDY25609 | Canola | cytosol | 14.15 | 2.42 |
| CDY49999 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.38 | 2.29 |
| CDX89490 | Canola | cytosol | 13.21 | 2.26 |
| CDY13742 | Canola | mitochondrion | 13.21 | 2.24 |
| CDY42768 | Canola | cytosol | 10.38 | 2.23 |
| CDX92741 | Canola | cytosol | 10.38 | 2.23 |
| CDX76904 | Canola | mitochondrion, nucleus, peroxisome, plastid | 13.21 | 2.22 |
| CDX89376 | Canola | cytosol | 8.49 | 2.12 |
| CDY65294 | Canola | cytosol | 8.49 | 2.05 |
| CDX74180 | Canola | cytosol | 10.38 | 1.95 |
| CDY40663 | Canola | cytosol | 10.38 | 1.95 |
| CDY64706 | Canola | nucleus | 0.0 | 0.0 |
| CDX99471 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY51849 | EnsemblPlantsGene:GSBRNA2T00004331001 | Gene3D:3.30.1370.10 | GO:A0A078IQY6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom_type_1_sf | PANTHER:PTHR10288 | PANTHER:PTHR10288:SF149 |
| ProteinID:CDY51849 | ProteinID:CDY51849.1 | UniParc:UPI0004EF35B0 | UniProt:A0A078IQY6 | MapMan:35.2 | : |
Description
BnaA03g56160DBnaA03g56160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQY6]
Coordinates
chrLK033033:-:66883..67359
Molecular Weight (calculated)
11981.5 Da
IEP (calculated)
11.022
GRAVY (calculated)
-0.682
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSVTRANIR ILQKENVPKI ARQDEEMVQI TGNPDAAMKA LTQVILRLRA NAFDMNHGLV LLPTSFPYIS QVSGSSNKPK YAKRDGSKDQ DYGRLNLNSK
101: RRNHVS
101: RRNHVS
001: MASTLRNIHD QNVIASEDTV YRYLCPVKKT GSIIGKGGEI AKQIRSETKS NMRINEALPG CEERVVTMYS TNEELNHFGD DGELVCPALD ALFKVHDMVV
101: ADADQDDGTD DDNDLGEKQT VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP LVVREALYQV ASLLHDNPSR
201: FQHLLLSSSS SSMHQPGAML MSAALTSSHR NYAVRRDIAD AREFCVCFIC PAENVGGVIG KGGGFINQIR QETGATIRVN TSETDDDDCI IFISSKEFYE
301: DQSPAVNAAI RLQQRCSEKV GKDANDLAIS TRLLVSSSQI GCLIGKGGAV ISEMRSVTRA NIRILQKEDV PKIAREDEEM VQITGSPDAA MKALTQVILR
401: LRANSFDMDH GLVLLPTSFP YIPQVTESSS KSKYAKRDDH SKLNSNSKRR NHVS
101: ADADQDDGTD DDNDLGEKQT VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP LVVREALYQV ASLLHDNPSR
201: FQHLLLSSSS SSMHQPGAML MSAALTSSHR NYAVRRDIAD AREFCVCFIC PAENVGGVIG KGGGFINQIR QETGATIRVN TSETDDDDCI IFISSKEFYE
301: DQSPAVNAAI RLQQRCSEKV GKDANDLAIS TRLLVSSSQI GCLIGKGGAV ISEMRSVTRA NIRILQKEDV PKIAREDEEM VQITGSPDAA MKALTQVILR
401: LRANSFDMDH GLVLLPTSFP YIPQVTESSS KSKYAKRDDH SKLNSNSKRR NHVS
Arabidopsis Description
F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.