Factsheet for Bra026852.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33769	Canola	nucleus	100.0	100.0
Bra019674.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	76.29	90.46
AT1G14170.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	88.04	89.14
Bra024789.1-P	Field mustard	cytosol	54.43	70.21
VIT_01s0026g02650.t01	Wine grape	nucleus	61.65	52.27
PGSC0003DMT400047374	Potato	nucleus	54.43	49.53
Solyc05g007810.2.1	Tomato	nucleus	54.23	49.44
GSMUA_Achr7P11520_001	Banana	mitochondrion, nucleus	52.99	48.49
Zm00001d029328_P002	Maize	nucleus	53.4	47.87
GSMUA_Achr6P10750_001	Banana	nucleus	52.37	47.74
Os03t0376800-02	Rice	nucleus	53.2	47.6
KXG39277	Sorghum	nucleus	52.78	47.23
Bra008709.1-P	Field mustard	nucleus	48.45	45.45
TraesCS4A01G150800.1	Wheat	nucleus	49.9	44.9
TraesCS4B01G166500.2	Wheat	nucleus	49.9	42.98
TraesCS4D01G160700.2	Wheat	nucleus	49.69	42.81
HORVU4Hr1G049680.1	Barley	nucleus	50.1	41.75
Bra006294.1-P	Field mustard	nucleus	50.52	40.83
Bra025032.1-P	Field mustard	nucleus	30.31	22.76
Bra013302.1-P	Field mustard	nucleus	27.42	22.7
Bra022624.1-P	Field mustard	nucleus	28.66	21.03
Bra001111.1-P	Field mustard	cytosol	16.49	20.51
Bra003085.1-P	Field mustard	nucleus	27.01	20.5
Bra014290.1-P	Field mustard	plastid	23.51	19.62
Bra030226.1-P	Field mustard	plastid	22.47	17.58
Bra038508.1-P	Field mustard	cytosol, plastid	22.89	17.37
Bra013940.1-P	Field mustard	cytosol	14.23	16.24
Bra019133.1-P	Field mustard	cytosol	12.99	15.83
Bra024292.1-P	Field mustard	nucleus	27.22	15.4

Protein Annotations

EnsemblPlants:Bra026852.1	EnsemblPlants:Bra026852.1-P	EnsemblPlantsGene:Bra026852	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1
InterPro:KH_dom_type_1_sf	PANTHER:PTHR10288	PANTHER:PTHR10288:SF149	PFAM:PF00013	PFscan:PS50084	SEG:seg
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI0002542E12	UniProt:M4EDJ2	MapMan:35.1	:

Description

AT1G14170 (E=5e-227) | KH domain-containing protein

Coordinates

chrA09:+:33985248..33987029

Molecular Weight (calculated)

53308.1 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.433

Length

485 amino acids

Sequence
(BLAST)

001: MASTLRNIHG KRSNFQSEFP GNGGSKRRNL HDDDTDHNVI GSEDTVYRYL CPVKKTGSII GKGGEIAKQI RSETKSNMRI NEALPGCEER VVTIYSTSDE
101: LNHFGDDGEL VCPALDALFK VHDMVVADSN DNDDDDDGDE DLVGKQMVTV RMLVPSDQIG CVIGKGGQVI QKLRTETNAQ IRVIKDNLPP CALTLSHDEL
201: LQIIGEPLVV REALYQVASL LHDNPSRFQH SLLSSPSTMY QPGGMLMCAP LTSSHRNYTA RRDVADATEF CVCFICPAEN VGGVIGKGGG FINQIRQETG
301: ATIRVNTSET EEDDSIIFIS SKEFYEDQSP TVNAAIRLQE RCSEKVGKDT NDATISTRLL VSSSHIGCLI GKGGAVISEM RSVTRANIRI LQKENVPKIA
401: REDEEMVQIT GSPDAAMKAL TQVVLRLRAN AFDMNHGLVL LPTSFPYIPQ VSESSNRSKY AKRDGSRDQD YSKLSSNSKR RNHVS

Best Arabidopsis Sequence Match ( AT1G14170.3 )
(BLAST)

001: MASTLRNIHG KRSNLQSEFT GNGGSKRRNL HDETDQNVIA SEDTVYRYLC PVKKTGSIIG KGGEIAKQIR SETKSNMRIN EALPGCEERV VTMYSTNEEL
101: NHFGDDGELV CPALDALFKV HDMVVADADQ DDGTDDDNDL GEKQTVTVRM LVPSDQIGCV IGKGGQVIQN LRNDTNAQIR VIKDHLPACA LTLSHDELLL
201: IIGEPLVVRE ALYQVASLLH DNPSRFQHLL LSSSSSSMHQ PGAMLMSAAL TSSHRNYAVR RDIADAREFC VCFICPAENV GGVIGKGGGF INQIRQETGA
301: TIRVNTSETD DDDCIIFISS KEFYEDQSPA VNAAIRLQQR CSEKVGKDAN DLAISTRLLV SSSQIGCLIG KGGAVISEMR SVTRANIRIL QKEDVPKIAR
401: EDEEMVQITG SPDAAMKALT QVILRLRANS FDMDHGLVLL PTSFPYIPQV TESSSKSKYA KRDDHSKLNS NSKRRNHVS

Arabidopsis Description

F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.