CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42077	Soybean	plastid	91.86	92.33
KRH21739	Soybean	plastid	69.49	57.34
KRH10613	Soybean	plastid	67.63	54.88
VIT_03s0038g00420.t01	Wine grape	plastid	59.66	54.32
Solyc01g106020.2.1	Tomato	plastid	52.03	47.52
PGSC0003DMT400083772	Potato	plastid	51.69	47.43
KRH39475	Soybean	plastid	38.64	37.32
CDX84522	Canola	nucleus	45.93	36.57
KRH47290	Soybean	mitochondrion, nucleus	32.71	34.53
KRH74462	Soybean	nucleus	35.42	33.93
KRH44614	Soybean	mitochondrion, nucleus	31.53	32.92
AT5G64390.3	Thale cress	nucleus	47.63	32.45
Bra024292.1-P	Field mustard	nucleus	46.61	32.09
KRH52837	Soybean	plastid	33.39	29.14
KRH40065	Soybean	nucleus	26.1	28.52
KRG93559	Soybean	nucleus	26.44	28.47
AT5G09560.1	Thale cress	cytosol	28.81	28.33
KRH01196	Soybean	nucleus	25.93	28.18
KRH62129	Soybean	plastid	32.2	28.02
KRH18467	Soybean	nucleus	25.59	27.55
KRH64403	Soybean	nucleus	28.81	26.4
KRH53532	Soybean	nucleus	28.64	26.12
KRH58152	Soybean	cytosol	5.59	25.98
KRH42565	Soybean	nucleus	26.78	25.28
KRH58669	Soybean	endoplasmic reticulum, nucleus	26.44	25.12
OQU88922	Sorghum	nucleus, peroxisome, plastid	26.78	24.53
Zm00001d019538_P002	Maize	plastid	25.93	22.67
KRH00973	Soybean	nucleus, plastid	13.9	22.65
KRH02776	Soybean	nucleus	15.93	21.56
Os07t0439100-01	Rice	cytosol	8.31	21.03
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	13.73	20.88
KRH19104	Soybean	nucleus	15.42	20.87
KRG97000	Soybean	nucleus	15.08	19.96
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	14.75	19.64
KRH12329	Soybean	cytosol, nucleus	14.58	19.46
KRH37335	Soybean	cytosol, nucleus	14.58	19.41
KRH71306	Soybean	nucleus	14.24	16.97
KRG95633	Soybean	nucleus	15.42	16.95
KRH67322	Soybean	nucleus	15.08	16.82
KRH32136	Soybean	cytosol	14.92	15.58

Protein Annotations

EntrezGene:100814554	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:ACUP02004645	EnsemblPlantsGene:GLYMA_07G182400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1KL57	InterPro:IPR036612
InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH49838	ProteinID:KRH49838	ProteinID:KRH49838.1
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF173	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI00023C816A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:35040347..35047594

Molecular Weight (calculated)

61734.7 Da

IEP (calculated)

8.872

GRAVY (calculated)

-0.095

Length

590 amino acids

Sequence
(BLAST)

001: MAEPNSNPNH SNGHVNRSRP YTTHVTFRLL CHASRVGAII GKSGVLIKTL QEATGAKIRI EDAPPDSPDR VILVSAPAAA SDGEVSTAQV ALLKVFDRVL
101: DVAAETAGTE VGDRVVSCRL LADTSQVGAV IGKAGKVVEK IRMDTGCKIR VLNEGLPACT APSDEIVEVE GQLTSVKKAL VAVSGCLQDC PPPDRTKMTG
201: SRHYEVVRSE TCSVPLESLT NLHIDRRLQR SSTLSTLSNR SNGNASGAPK LSAEVNRVSA LDPKALQQEV TFRIICSNDR VGAVIGKGGS IVRALQNESG
301: AIISFGPSLV ECEDRLVTIT ASENPESRYS PAQKAVVLVF SKSVEAGVEK GLDMGSKKES YVTAQLVVPS NQVGCLLGKG GAIVSEMRKA TGANIRVIGN
401: DKVPKCVSDN DQLVQISGEF SNVQAAIYNA TGRLRDNLFV STQNSGGARS LSSVLSGGKP TVAVSLSLNR HSLPGLQAPQ TVAGINSRVT NGVSRGLTSQ
501: KGGLELVSGS KTAIVTNTTV QIAVPDDVIG SVYGENGSNL ARLRQISGAK VIVHEPRPGT SDRTIIISGT PDETRAAQSL LQAFILAGSS

Best Arabidopsis Sequence Match ( AT1G51580.1 )
(BLAST)

001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S

Arabidopsis Description

At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.