Factsheet for GSMUA_Achr5P03200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g084000.2.1	Tomato	nucleus	46.04	51.48
GSMUA_Achr7P01590_001	Banana	nucleus	78.11	47.05
Solyc01g097010.2.1	Tomato	nucleus	58.49	42.7
Bra001111.1-P	Field mustard	cytosol	55.09	37.44
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	60.38	36.12
KRG97000	Soybean	nucleus	60.75	36.1
VIT_14s0081g00440.t01	Wine grape	cytosol	64.15	33.27
Os03t0627500-01	Rice	cytosol	61.89	32.16
EES16283	Sorghum	cytosol	61.13	31.83
TraesCS4B01G069700.1	Wheat	nucleus	60.75	31.51
TraesCS4D01G068400.1	Wheat	nucleus	60.75	31.32
Zm00001d030968_P006	Maize	extracellular	60.0	31.3
VIT_07s0141g00800.t01	Wine grape	cytosol	50.57	30.95
TraesCS5D01G071000.1	Wheat	nucleus	60.0	30.64
TraesCS5B01G066800.1	Wheat	nucleus	60.0	30.58
TraesCS5A01G059500.1	Wheat	cytosol	60.0	30.58
TraesCS4A01G245800.1	Wheat	nucleus	60.38	30.48
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	60.0	29.34
Solyc09g066120.2.1	Tomato	nucleus	52.83	28.46
PGSC0003DMT400051262	Potato	nucleus	53.58	28.29
PGSC0003DMT400051668	Potato	cytosol	53.21	27.54
CDX74180	Canola	cytosol	55.09	25.93
CDY40663	Canola	cytosol	55.09	25.93
KRH67322	Soybean	nucleus	51.32	25.71
KRG95633	Soybean	nucleus	52.08	25.7
AT3G04610.2	Thale cress	cytosol	54.34	24.96
KRH32136	Soybean	cytosol	53.21	24.96
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	60.38	24.35
KRH71306	Soybean	nucleus	43.77	23.43
OQU91315	Sorghum	plastid	42.64	23.25
CDY64706	Canola	nucleus	27.92	18.32
GSMUA_Achr8P14980_001	Banana	cytosol	37.36	17.68
GSMUA_Achr11P...	Banana	mitochondrion	37.74	17.45
GSMUA_Achr7P11520_001	Banana	mitochondrion, nucleus	21.89	10.94
GSMUA_Achr6P10750_001	Banana	nucleus	19.25	9.59
GSMUA_Achr3P21030_001	Banana	nucleus	19.62	7.81
GSMUA_Achr6P13890_001	Banana	cytosol	17.74	7.18
GSMUA_Achr6P03670_001	Banana	cytosol, nucleus, plastid	17.36	7.07
GSMUA_Achr10P...	Banana	cytosol	16.98	6.8
GSMUA_Achr10P...	Banana	nucleus	16.6	6.53
GSMUA_Achr9P18150_001	Banana	endoplasmic reticulum, golgi	16.98	6.51
GSMUA_Achr2P15270_001	Banana	nucleus	16.98	6.47
Solyc06g084010.2.1	Tomato	nucleus	1.89	1.55
Os12t0597600-01	Rice	cytosol	0.38	0.6

Protein Annotations

Gene3D:3.30.1370.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
EnsemblPlantsGene:GSMUA_Achr5G03200_001	EnsemblPlants:GSMUA_Achr5P03200_001	EnsemblPlants:GSMUA_Achr5T03200_001	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1
InterPro:KH_dom_type_1_sf	UniProt:M0SV99	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF224
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI000296A87A	SEG:seg	:	:

Description

KH domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G03200_001]

Coordinates

chr5:+:2198033..2200801

Molecular Weight (calculated)

28411.4 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.405

Length

265 amino acids

Sequence
(BLAST)

001: MSLVYLTADN LPPVALPDDR VVEIQGEPNG THKAVELIAT HLRKYLVDRS VLPLFEKRLS LSNVHMEQNM PAAQTWSQPQ GLPPNSGGLG YGGNPQFIPP
101: RPHHNFYPPP ERPLLEKQPH HGISLYGQNT SPMGIHSAAN QHAPTMISQV TQHMQISLSY ADAVIGEAGA NISYIRRSSG ATITIQESRG VPGEMTVEIT
201: GSATQVQTAQ QLIQNFMAAA AAPQPSTVGS SDHGYSSYQA HGPMYGSPAN AGPYGSSTYG ANYGY

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.