Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P13890_001 | Banana | cytosol | 84.74 | 85.65 |
| VIT_18s0001g08280.t01 | Wine grape | cytosol | 57.55 | 54.35 |
| Os01t0235800-01 | Rice | cytosol | 37.92 | 53.63 |
| KRH52837 | Soybean | plastid | 51.21 | 50.15 |
| KRH62129 | Soybean | plastid | 51.21 | 50.0 |
| Solyc04g077060.2.1 | Tomato | nucleus | 34.74 | 48.63 |
| PGSC0003DMT400012623 | Potato | nucleus, plastid | 48.94 | 48.0 |
| TraesCS3A01G158700.1 | Wheat | nucleus | 47.58 | 44.68 |
| TraesCS3B01G189700.1 | Wheat | nucleus | 47.58 | 44.49 |
| TraesCS3D01G166400.1 | Wheat | cytosol, mitochondrion, nucleus | 47.28 | 44.4 |
| EES02175 | Sorghum | nucleus, plastid | 46.98 | 43.44 |
| Zm00001d009014_P004 | Maize | nucleus | 45.92 | 43.12 |
| HORVU3Hr1G057270.16 | Barley | plastid | 47.13 | 40.21 |
| GSMUA_Achr6P10750_001 | Banana | nucleus | 26.89 | 33.46 |
| GSMUA_Achr10P... | Banana | nucleus | 33.38 | 32.79 |
| GSMUA_Achr7P11520_001 | Banana | mitochondrion, nucleus | 26.13 | 32.64 |
| GSMUA_Achr3P21030_001 | Banana | nucleus | 27.95 | 27.78 |
| GSMUA_Achr6P03670_001 | Banana | cytosol, nucleus, plastid | 25.53 | 25.96 |
| GSMUA_Achr2P15270_001 | Banana | nucleus | 26.89 | 25.61 |
| GSMUA_Achr9P18150_001 | Banana | endoplasmic reticulum, golgi | 25.83 | 24.75 |
| GSMUA_Achr7P01590_001 | Banana | nucleus | 13.75 | 20.68 |
| GSMUA_Achr5P03200_001 | Banana | cytosol | 6.8 | 16.98 |
| GSMUA_Achr8P14980_001 | Banana | cytosol | 13.6 | 16.07 |
| GSMUA_Achr11P... | Banana | mitochondrion | 13.29 | 15.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P15060_001 | EnsemblPlants:GSMUA_Achr10T15060_001 | EnsemblPlantsGene:GSMUA_Achr10G15060_001 | Gene3D:3.30.1370.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF148 | PFAM:PF00013 | PFscan:PS50084 | SEG:seg | SMART:SM00322 |
| SUPFAM:SSF54791 | UniParc:UPI00029589DB | UniProt:M0RID2 | MapMan:35.1 | : | : |
Description
Putative KH domain-containing protein At4g18375 [Source:GMGC_GENE;Acc:GSMUA_Achr10G15060_001]
Coordinates
chr10:+:23165424..23170804
Molecular Weight (calculated)
71526.5 Da
IEP (calculated)
8.404
GRAVY (calculated)
-0.256
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFPLLPSKR TFEQNPLEHT GRGKWKKTGP SITLQNQVKV PLGAIIFRIL CPASKSGSVI GKGGGIVARI RHKTGAKIRL EETVPGCDER VIVITGLEKD
101: AELGSKHNNS KLDGVPSSAV KALVLVFERL IEGESENDDE DDTNKKHSTV SARLLVLSGQ VGCVLGKGGS VIKQMSADSG AQIRILPRDK LPLCASQQDE
201: IVQVTGGVES VKKALHLVAQ QLLDNPPREH DLFPSLGSSG PSSDPFASIP RAEGLPPPNF HYPPQVPPFS NRPHDITDFH PGIGPPFPKF HESGPLLQPQ
301: VSPEPITYRL LCSNDKVGSV IGKGGNIVKG LKNDTGCEIK VLETTPESED RIIVISGLAL PSDRIAPVQD AVLRVQHRLV MAVPDTKEST VLSRLLVASN
401: QTGCLLGKGG SIIAEMRKLS GAHIRILGRE QIPRGVLEND EVVQISGEFG AVQEALLQIT ARLKLHVFRD KLPAMNPNMP PAFVEQLPPY GLYMGRRESS
501: PPRLHPYLPP FQKDPVGHPF QERSVFSHPV HGSGIPLGVE RPASWPPQGM RDVGGPMLLP DYPGDPQRRK GRFASGSQPA PITSVDVFVP RSLVPSIYGE
601: DGGCLKRIRE ISEAKIIITE PRPEATETVI IISGTPEQTH AAQSLIHAFV LSETVPLEST KS
101: AELGSKHNNS KLDGVPSSAV KALVLVFERL IEGESENDDE DDTNKKHSTV SARLLVLSGQ VGCVLGKGGS VIKQMSADSG AQIRILPRDK LPLCASQQDE
201: IVQVTGGVES VKKALHLVAQ QLLDNPPREH DLFPSLGSSG PSSDPFASIP RAEGLPPPNF HYPPQVPPFS NRPHDITDFH PGIGPPFPKF HESGPLLQPQ
301: VSPEPITYRL LCSNDKVGSV IGKGGNIVKG LKNDTGCEIK VLETTPESED RIIVISGLAL PSDRIAPVQD AVLRVQHRLV MAVPDTKEST VLSRLLVASN
401: QTGCLLGKGG SIIAEMRKLS GAHIRILGRE QIPRGVLEND EVVQISGEFG AVQEALLQIT ARLKLHVFRD KLPAMNPNMP PAFVEQLPPY GLYMGRRESS
501: PPRLHPYLPP FQKDPVGHPF QERSVFSHPV HGSGIPLGVE RPASWPPQGM RDVGGPMLLP DYPGDPQRRK GRFASGSQPA PITSVDVFVP RSLVPSIYGE
601: DGGCLKRIRE ISEAKIIITE PRPEATETVI IISGTPEQTH AAQSLIHAFV LSETVPLEST KS
001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
Arabidopsis Description
At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.