Factsheet for TraesCS4B01G069700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G068400.1	Wheat	nucleus	96.87	96.3
TraesCS4A01G245800.1	Wheat	nucleus	96.09	93.52
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	92.56	87.27
Os03t0627500-01	Rice	cytosol	79.26	79.41
OQU91315	Sorghum	plastid	62.82	66.05
TraesCS5B01G066800.1	Wheat	nucleus	66.93	65.77
GSMUA_Achr7P01590_001	Banana	nucleus	55.38	64.32
GSMUA_Achr5P03200_001	Banana	cytosol	31.51	60.75
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	76.13	59.21
Bra001111.1-P	Field mustard	cytosol	44.03	57.69
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	48.92	56.43
KRG97000	Soybean	nucleus	48.73	55.83
Solyc01g097010.2.1	Tomato	nucleus	39.53	55.65
VIT_14s0081g00440.t01	Wine grape	cytosol	53.03	53.03
VIT_07s0141g00800.t01	Wine grape	cytosol	44.81	52.89
Solyc06g084000.2.1	Tomato	nucleus	23.48	50.63
PGSC0003DMT400051262	Potato	nucleus	47.95	48.8
Solyc09g066120.2.1	Tomato	nucleus	46.97	48.78
PGSC0003DMT400051668	Potato	cytosol	48.14	48.05
CDY64706	Canola	nucleus	36.2	45.79
KRH71306	Soybean	nucleus	43.44	44.85
KRH67322	Soybean	nucleus	46.18	44.61
KRG95633	Soybean	nucleus	46.58	44.32
AT3G04610.2	Thale cress	cytosol	49.51	43.85
CDX74180	Canola	cytosol	48.14	43.69
CDY40663	Canola	cytosol	47.95	43.52
KRH32136	Soybean	cytosol	46.58	42.12
TraesCS1B01G229900.1	Wheat	cytosol	33.46	38.08
Solyc06g084010.2.1	Tomato	nucleus	21.53	34.06
TraesCS6B01G113100.1	Wheat	cytosol	27.01	29.55
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	32.09	27.38
TraesCS4B01G166500.2	Wheat	nucleus	18.98	17.23
TraesCS5B01G551800.1	Wheat	nucleus	18.4	14.9
TraesCS3B01G580700.1	Wheat	nucleus	18.0	14.58
TraesCS3B01G189700.1	Wheat	nucleus	19.18	13.84
TraesCS7B01G245400.2	Wheat	nucleus	17.61	12.68
TraesCS1B01G181000.3	Wheat	nucleus	18.98	11.53
TraesCS5B01G276400.1	Wheat	plastid	13.7	11.2

Protein Annotations

EnsemblPlants:TraesCS4B01G069700.1	EnsemblPlantsGene:TraesCS4B01G069700	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PANTHER:PTHR10288	PANTHER:PTHR10288:SF155	PFAM:PF00013	PFscan:PS50084	SEG:seg	SMART:SM00322
SUPFAM:SSF54791	TIGR:cd00105	TIGR:cd02396	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4B:-:63749760..63759072

Molecular Weight (calculated)

55185.2 Da

IEP (calculated)

4.527

GRAVY (calculated)

-0.698

Length

511 amino acids

Sequence
(BLAST)

001: MDEENFTEHG IGELPQNLYD EEQLNSYDNT AQYNEEPSDS YNEEPGDQFE EGAGNTYNEV QANLLSEEPE TQYDDEPANV YQEENAYNGE VKQQESLQVE
101: GDDKRWPGWP GDSVFRILVP AQKVGAIIGR KGEFIKRMCE ESKARIKILD GPPGVTERAV MISAKDEPDE PISPAMDGLL KIHKRITDGS DGESGQLQRG
201: ASNVGPTRLL VPASQAGSLI GKQGATIKSI QDSSKSVVRI VENVPPVALN DDRVVEIQGE PLGVHKAVEL IASHLRKFLV DHSVLPLFEQ QMKMHSVQRE
301: QPMAAPQHWA PPQPWVPPPN LPPGGPGYGG NPQFMPPRPQ DNYYPRPDVP PMEKQPHYGI SAYGREAPPS GTSGNQPPLH VASQVHNMQI PLSYADAVIG
401: AAGASISYIR RHSGAAVTIQ ESRGAPGEMT VEIIGSASQV QTAQQLIQNF MAEAAPQTRP PASNPPAPPV DPGYGSYPPP PYGAPPTGAE GPAPHNGGGY
501: GGGSYHPSYG Y

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.