Factsheet for Zm00001d013963_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38256	Sorghum	nucleus	83.95	85.62
Zm00001d032597_P006	Maize	golgi, plasma membrane	87.38	72.31
Os10t0495000-01	Rice	nucleus	66.18	70.87
TraesCS1D01G161200.3	Wheat	nucleus	67.77	66.47
TraesCS1A01G164200.3	Wheat	nucleus	67.89	65.87
TraesCS1B01G181000.3	Wheat	nucleus	67.77	65.76
HORVU1Hr1G043680.7	Barley	nucleus	65.44	65.52
GSMUA_Achr3P21030_001	Banana	nucleus	40.2	49.25
VIT_14s0006g02960.t01	Wine grape	nucleus, plastid	32.84	39.65
Zm00001d029328_P002	Maize	nucleus	23.16	34.94
Solyc03g034200.2.1	Tomato	nucleus	29.29	33.8
Zm00001d024270_P001	Maize	nucleus	21.2	27.37
Zm00001d049390_P001	Maize	nucleus	20.71	26.78
Zm00001d006055_P002	Maize	plastid	19.85	25.96
Zm00001d009014_P004	Maize	nucleus	21.45	24.82
Zm00001d046033_P001	Maize	nucleus	18.38	22.49
Zm00001d037055_P003	Maize	nucleus	18.38	20.27
Zm00001d003290_P002	Maize	mitochondrion	5.64	20.09
Zm00001d029973_P001	Maize	plasma membrane	10.78	19.64
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	10.54	19.5
Zm00001d019538_P002	Maize	plastid	14.83	17.93
Zm00001d030968_P006	Maize	extracellular	11.03	17.72
Zm00001d015093_P001	Maize	cytosol	9.44	16.45
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	11.52	14.31
Zm00001d010815_P001	Maize	mitochondrion	6.13	14.29
Zm00001d014180_P004	Maize	cytosol	11.15	14.06

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	UniProt:A0A1D6GNU3	ProteinID:AQK64895.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1
InterPro:KH_dom_type_1_sf	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF130	SMART:SM00322
SUPFAM:SSF54791	UniParc:UPI00084427D5	EnsemblPlantsGene:Zm00001d013963	EnsemblPlants:Zm00001d013963_P002	EnsemblPlants:Zm00001d013963_T002	SEG:seg

Description

Flowering locus K homology domain

Coordinates

chr5:+:26419393..26424294

Molecular Weight (calculated)

89991.1 Da

IEP (calculated)

7.712

GRAVY (calculated)

-0.604

Length

816 amino acids

Sequence
(BLAST)

001: MDFSLCGQKG TTRLILMDYD KSRRSNSKKR RHSNSDDGKR KRLSSRHDDT SMSSEPIETI YRILCPAKKI GSVLGRGGDI VKALREETKA KIRVADSIPG
101: ADERVIIIFN YQNQPELTDE AAEKQISDGL GNMKPHCFAQ DALLKIHDKI VADEIYDEVA HDESSDDVTA RILVQGNQVG CLLGKGGSII QQLRSDTGAG
201: IRVLSSENLP QCALQSDELV QDMSIIYNIV MTFQISGAPS LVRKALYEIS TRLHQHPRKE NRPLEQIIDA STQRKHESPT LQHENPMLPH LHSHHPPPIP
301: LLDPYRSGPQ YPVSETEEFS IRILCASELI GSVIGKSGAN VRRVEQQTGA RIKVQEIDKD ASGERLIIVS SNEIPTEPIS PTIEALILLH DKVSASSEKH
401: HSSTRLVVPS NKVGCILGEG GQVITEMRRR TGAEIRVYSK ADKPKYLSFG DELVQVAGPP AIARGALTEI ASRLRTRTLR DTSTANNPPP FAPSDDPTVD
501: MPSRKLTLYG GPTNDTPYGR PANDPLYGRP AIDPPFGRPT NDRPYGRPAI VPPFGRPTND PPYGRPANDP PYERPTNDPP YGRPSSTIAY GRPNRSAPRD
601: PSDAYPVDYF SKREHPSGGP MFTSNAPSAA YERYAAPTHF PTREPPSTFS HRSYRDHMPT DSYSSRGTQK LDITRDGNSD AYDYTEVHLC QHLIFCIYLN
701: FIIAQAAGQI HGLEDYRGLP SASGRFSSTI ELRIPNSSLE SIVGVGGVNL AEIRQISGAR LRLHEAHAGS SESVVEIQGT LDQAKAAQSL LEGFISANSR
801: QQQSHSSRMP LYPRWG

Best Arabidopsis Sequence Match ( AT1G14170.1 )
(BLAST)

001: MASTLRNIHD QNVIASEDTV YRYLCPVKKT GSIIGKGGEI AKQIRSETKS NMRINEALPG CEERVVTMYS TNEELNHFGD DGELVCPALD ALFKVHDMVV
101: ADADQDDGTD DDNDLGEKQT VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP LVVREALYQV ASLLHDNPSR
201: FQHLLLSSSS SSMHQPGAML MSAALTSSHR NYAVRRDIAD AREFCVCFIC PAENVGGVIG KGGGFINQIR QETGATIRVN TSETDDDDCI IFISSKEFYE
301: DQSPAVNAAI RLQQRCSEKV GKDANDLAIS TRLLVSSSQI GCLIGKGGAV ISEMRSVTRA NIRILQKEDV PKIAREDEEM VQITGSPDAA MKALTQVILR
401: LRANSFDMDH GLVLLPTSFP YIPQVTESSS KSKYAKRDDH SKLNSNSKRR NHVS

Arabidopsis Description

F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.