Factsheet for Solyc11g010840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041750	Potato	plastid	93.31	93.31
Solyc01g106020.2.1	Tomato	plastid	34.91	33.13
KRH39475	Soybean	plastid	32.79	32.9
Solyc12g055790.1.1	Tomato	nucleus	12.89	31.73
KRH74462	Soybean	nucleus	30.02	29.87
CDY13742	Canola	mitochondrion	28.22	27.64
CDX89490	Canola	cytosol	27.9	27.63
CDX76904	Canola	mitochondrion, nucleus, peroxisome, plastid	28.06	27.26
Bra030226.1-P	Field mustard	plastid	27.57	27.26
Bra038508.1-P	Field mustard	cytosol, plastid	28.39	27.23
CDY25609	Canola	cytosol	27.57	27.21
AT2G22600.1	Thale cress	mitochondrion	27.41	26.58
Solyc12g055780.1.1	Tomato	cytosol, nucleus	15.82	26.22
Solyc05g007810.2.1	Tomato	nucleus	21.53	24.81
OQU88922	Sorghum	nucleus, peroxisome, plastid	24.47	23.29
Solyc04g077060.2.1	Tomato	nucleus	17.62	22.83
Solyc08g048500.2.1	Tomato	nucleus	22.51	22.37
Solyc02g067210.2.1	Tomato	nucleus	22.02	21.92
Solyc05g041740.1.1	Tomato	plastid	7.5	21.9
Solyc03g082980.2.1	Tomato	nucleus	23.82	21.86
Zm00001d019538_P002	Maize	plastid	23.82	21.63
Solyc02g088120.2.1	Tomato	nucleus	18.43	21.52
Solyc07g008490.2.1	Tomato	nucleus	15.33	19.5
Os07t0439100-01	Rice	cytosol	7.18	18.88
Solyc03g034200.2.1	Tomato	nucleus	21.21	18.39
Solyc05g043210.1.1	Tomato	plastid	6.69	16.21
Solyc01g090480.2.1	Tomato	nucleus	11.42	15.77
Solyc01g097010.2.1	Tomato	nucleus	9.3	15.7
Solyc09g066120.2.1	Tomato	nucleus	11.91	14.84
Solyc08g074330.1.1	Tomato	plastid	4.89	13.22
Solyc06g084010.2.1	Tomato	nucleus	6.69	12.69
Solyc05g042180.1.1	Tomato	plastid	5.06	11.36
Solyc05g043200.1.1	Tomato	nucleus, peroxisome, plastid	5.38	10.31
Solyc06g084000.2.1	Tomato	nucleus	3.92	10.13

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR036612	UniProt:K4D5P2	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF173	SMART:SM00322	SUPFAM:SSF54791
EnsemblPlantsGene:Solyc11g010840.1	EnsemblPlants:Solyc11g010840.1.1	UniParc:UPI00027697C3	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:3855377..3861908

Molecular Weight (calculated)

66261.5 Da

IEP (calculated)

9.071

GRAVY (calculated)

-0.266

Length

613 amino acids

Sequence
(BLAST)

001: MNNQNHYRPP IKKFGSGSSS GGDQTAVLHP GQVHFRLLCH VSTAGGVIGN SGGLIRQLEA QTGCRIRFED PLPNCHERVV NITGDSIIDR KIRVSYEGSD
101: EEVEVVEVSR AQEGLIRVYE RVLQVEGNGG AVGCRLLAIS GQIGALMGKG GVIVDGIRKS TGAKIKVLTK EQLPACAVVP GEELIQIMGV IAVVKRALVH
201: VSRRLQIRLP AERYKDQATS KGASHEQPVD YPLDTKSSIQ PLPRNAVNHS SVAHSLSSDV DRVLNLDADS AQRKVVFRLL CSYISAGGVI GKGAQIVKAL
301: EKDTGASIKF STPTVRSKER VAIIYSLEVR KPLYSPAQVA TVRVFERSVE VSREHGHIKA GSISARILVG PHEVKCLLDE KGIVSSDIGS AMRVEVQLLD
401: AENAPNCAAE NDKIVQIIGE HDNVRNALFQ LTGRLREMVF SSLVSEVAVP TKYSCSCSKS SKHEFGTSMP SQSDHLSSFS TLYQTDHLGF GPNLGGPHTL
501: LQDKSKDRSN NKMGKPVKRS MGSWKSSHGR RESGRMDENE TASKPIVVNV PKQKFGSVYG EDGSNLTRLK EISGATVVLQ DPGPGECDGK VTISGTPEQI
601: QMAQSLLQAF IFL

Best Arabidopsis Sequence Match ( AT1G51580.1 )
(BLAST)

001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S

Arabidopsis Description

At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.