Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G422200.1 | Wheat | mitochondrion | 91.36 | 95.36 |
| TraesCS2A01G424400.1 | Wheat | mitochondrion | 89.88 | 93.81 |
| Os04t0612800-01 | Rice | mitochondrion | 81.48 | 84.29 |
| KXG27099 | Sorghum | mitochondrion | 81.48 | 83.65 |
| Zm00001d002345_P001 | Maize | mitochondrion | 80.37 | 82.72 |
| HORVU2Hr1G099330.11 | Barley | mitochondrion | 76.67 | 80.03 |
| GSMUA_Achr11P... | Banana | mitochondrion | 55.68 | 60.37 |
| KRH57615 | Soybean | cytosol | 52.47 | 58.38 |
| VIT_12s0028g00090.t01 | Wine grape | plastid | 55.56 | 56.11 |
| PGSC0003DMT400067470 | Potato | mitochondrion | 54.32 | 55.42 |
| Solyc08g078150.1.1 | Tomato | nucleus | 54.07 | 55.16 |
| Bra003609.1-P | Field mustard | mitochondrion, plastid | 54.32 | 53.33 |
| CDX79321 | Canola | mitochondrion, plastid | 54.2 | 53.21 |
| KRG94011 | Soybean | plastid | 53.7 | 53.18 |
| CDX67993 | Canola | mitochondrion, plastid | 52.72 | 52.07 |
| AT1G79490.1 | Thale cress | mitochondrion, plastid | 53.58 | 51.91 |
| TraesCS5B01G559600.1 | Wheat | plastid | 16.05 | 18.26 |
| TraesCS4B01G245000.1 | Wheat | plastid | 14.69 | 17.27 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G444000.1 | EnsemblPlantsGene:TraesCS2B01G444000 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002625 | InterPro:IPR002885 | InterPro:IPR011990 | InterPro:PPR_long | InterPro:Pentatricopeptide_repeat | InterPro:Smr_dom |
| InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF326 | PFAM:PF01535 | PFAM:PF17177 | PFscan:PS51375 |
| SEG:seg | SMART:SM00463 | TIGRFAMs:TIGR00756 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:636777194..636779626
Molecular Weight (calculated)
88809.4 Da
IEP (calculated)
9.451
GRAVY (calculated)
0.074
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MARWCCSLTF GPWAVTGYST TSEPPRRAER DHADMLLRAG LPHLRRRAAA LPLSLAPRRL SSDPPPSVEW IDTVDYLDET GEVLSSAPGA RPAVPGADPT
101: ILSGSSAHPL PRPAAAARIA ALALRHRSGP ALSAALSALP SQPDPALLLL AANSLPASDP TPLLSLVGWA RRQPWFVPSD DLSFIVAARL SPATHSSDLM
201: SLFDDALLHP EPASFPKTLN AVVSALSTHG LLEPAFYCFK RLRDAGFHGL QTPTYNALLS LLLARGLAFK AFEVLDEMSV AGCDLDKGTY ELAVPALARA
301: GRIDASRKLF DEMRQRDGVR PASPGVYSTM VDVLAKSGRL DAAMGMYREM VAVGHRVSTA VSTAMLEGLV KAGKLDAGME LWEEMQRGGL RPSFGLYTMV
401: VEANARSGRL DVAAKLFGDM EKSGFFPTPA TYACLVEMHA SAGNVDVAMR MYHSMANAGT RPGLSTFTAL LTMLANKKLL DLAAKVLLEM KASGFPIEVT
501: ASDLLMIYIK DGSTELALRW LRFMGSAGIR TNNFIIRQLF ESCMKMGLYD SARPLLETYV GAAAKVDMIL YTSILAHLVR CQDEDSERAI MNILRVSRHK
601: AHDFMCGLFT GPEQRKKPVL SFVREFFQGI DYENEESAAR YFVNVLLNYL VLMGQMNRAR CVWKVAYENK LFPKAIVFDQ HIAWSLDIRN LSVGAALVST
701: VHTLHRFRKR MLYYGVVPRR IKLVTGPTLK MVVAQVLASL ESPFEVSKVV LRAPGDSVLE WFKKPIVQQF LLNEIPSKSD VLMHKLNVMF PSSAPEARSL
801: ALPRSLGMSR
101: ILSGSSAHPL PRPAAAARIA ALALRHRSGP ALSAALSALP SQPDPALLLL AANSLPASDP TPLLSLVGWA RRQPWFVPSD DLSFIVAARL SPATHSSDLM
201: SLFDDALLHP EPASFPKTLN AVVSALSTHG LLEPAFYCFK RLRDAGFHGL QTPTYNALLS LLLARGLAFK AFEVLDEMSV AGCDLDKGTY ELAVPALARA
301: GRIDASRKLF DEMRQRDGVR PASPGVYSTM VDVLAKSGRL DAAMGMYREM VAVGHRVSTA VSTAMLEGLV KAGKLDAGME LWEEMQRGGL RPSFGLYTMV
401: VEANARSGRL DVAAKLFGDM EKSGFFPTPA TYACLVEMHA SAGNVDVAMR MYHSMANAGT RPGLSTFTAL LTMLANKKLL DLAAKVLLEM KASGFPIEVT
501: ASDLLMIYIK DGSTELALRW LRFMGSAGIR TNNFIIRQLF ESCMKMGLYD SARPLLETYV GAAAKVDMIL YTSILAHLVR CQDEDSERAI MNILRVSRHK
601: AHDFMCGLFT GPEQRKKPVL SFVREFFQGI DYENEESAAR YFVNVLLNYL VLMGQMNRAR CVWKVAYENK LFPKAIVFDQ HIAWSLDIRN LSVGAALVST
701: VHTLHRFRKR MLYYGVVPRR IKLVTGPTLK MVVAQVLASL ESPFEVSKVV LRAPGDSVLE WFKKPIVQQF LLNEIPSKSD VLMHKLNVMF PSSAPEARSL
801: ALPRSLGMSR
001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
Arabidopsis Description
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.