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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79321 Canola mitochondrion, plastid 85.53 86.67
Bra003609.1-P Field mustard mitochondrion, plastid 84.45 85.58
CDX67993 Canola mitochondrion, plastid 83.73 85.37
KRH57615 Soybean cytosol 69.14 79.4
PGSC0003DMT400067470 Potato mitochondrion 73.33 77.2
VIT_12s0028g00090.t01 Wine grape plastid 73.8 76.93
Solyc08g078150.1.1 Tomato nucleus 72.97 76.83
KRG94011 Soybean plastid 72.01 73.59
GSMUA_Achr11P... Banana mitochondrion 53.35 59.71
TraesCS2D01G422200.1 Wheat mitochondrion 51.55 55.54
Os04t0612800-01 Rice mitochondrion 51.67 55.17
KXG27099 Sorghum mitochondrion 52.03 55.13
TraesCS2A01G424400.1 Wheat mitochondrion 50.48 54.38
Zm00001d002345_P001 Maize mitochondrion 50.96 54.13
TraesCS2B01G444000.1 Wheat plastid 51.91 53.58
HORVU2Hr1G099330.11 Barley mitochondrion 48.33 52.06
AT4G16390.1 Thale cress plastid 15.67 18.66
AT1G18900.3 Thale cress mitochondrion 19.26 18.17
AT5G46580.1 Thale cress plastid 15.43 18.14
AT1G74750.2 Thale cress plastid 18.18 17.78
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:844287ProteinID:AAD30226.1ProteinID:AEE36250.1ArrayExpress:AT1G79490
EnsemblPlantsGene:AT1G79490RefSeq:AT1G79490TAIR:AT1G79490RefSeq:AT1G79490-TAIR-GEnsemblPlants:AT1G79490.1TAIR:AT1G79490.1
Unigene:At.50050EMBL:BX817051Symbol:EMB2217GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003824GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0008150
GO:GO:0008152GO:GO:0009451GO:GO:0009987GO:GO:0016787GO:GO:0090305InterPro:IPR002625
InterPro:IPR002885InterPro:IPR011990RefSeq:NP_178067.1PFAM:PF13812PFAM:PF17177PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007057PO:PO:0007098PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195InterPro:PPR_longPFscan:PS50828PFscan:PS51375
PANTHER:PTHR24015PANTHER:PTHR24015:SF326InterPro:Pentatricopeptide_repeatUniProt:Q9SAK0SMART:SM00463InterPro:Smr_dom
TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000009E685SEG:seg::
Description
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
Coordinates
chr1:+:29900443..29903319
Molecular Weight (calculated)
94177.3 Da
IEP (calculated)
9.441
GRAVY (calculated)
-0.034
Length
836 amino acids
Sequence
(BLAST)
001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.