Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27297264
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG27099 | Sorghum | mitochondrion | 91.99 | 91.76 |
| Os04t0612800-01 | Rice | mitochondrion | 85.51 | 85.95 |
| TraesCS2A01G424400.1 | Wheat | mitochondrion | 82.21 | 83.38 |
| TraesCS2D01G422200.1 | Wheat | mitochondrion | 82.08 | 83.25 |
| TraesCS2B01G444000.1 | Wheat | plastid | 82.72 | 80.37 |
| HORVU2Hr1G099330.11 | Barley | mitochondrion | 70.9 | 71.91 |
| GSMUA_Achr11P... | Banana | mitochondrion | 57.31 | 60.37 |
| KRH57615 | Soybean | cytosol | 53.75 | 58.1 |
| VIT_12s0028g00090.t01 | Wine grape | plastid | 55.91 | 54.86 |
| Solyc08g078150.1.1 | Tomato | nucleus | 54.51 | 54.03 |
| PGSC0003DMT400067470 | Potato | mitochondrion | 54.38 | 53.9 |
| KRG94011 | Soybean | plastid | 55.65 | 53.55 |
| CDX79321 | Canola | mitochondrion, plastid | 54.64 | 52.12 |
| Bra003609.1-P | Field mustard | mitochondrion, plastid | 54.38 | 51.88 |
| CDX67993 | Canola | mitochondrion, plastid | 54.0 | 51.83 |
| AT1G79490.1 | Thale cress | mitochondrion, plastid | 54.13 | 50.96 |
| Zm00001d034892_P001 | Maize | plastid | 17.15 | 18.85 |
| Zm00001d028221_P001 | Maize | plastid | 15.88 | 18.09 |
| Zm00001d031217_P003 | Maize | mitochondrion | 17.92 | 16.53 |
| Zm00001d025264_P001 | Maize | mitochondrion, peroxisome | 6.99 | 15.03 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A096TBR6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | InterPro:IPR002625 |
| InterPro:IPR002885 | InterPro:IPR011990 | ProteinID:ONM14019.1 | PFAM:PF01535 | PFAM:PF17177 | InterPro:PPR_long |
| PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF326 | InterPro:Pentatricopeptide_repeat | SMART:SM00463 |
| InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0002221075 | EnsemblPlantsGene:Zm00001d002345 | EnsemblPlants:Zm00001d002345_P001 |
| EnsemblPlants:Zm00001d002345_T001 | SEG:seg | : | : | : | : |
Description
phm5822Pentatricopeptide repeat-containing protein mitochondrial
Coordinates
chr2:+:10635912..10638275
Molecular Weight (calculated)
85532.6 Da
IEP (calculated)
9.461
GRAVY (calculated)
0.183
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRVGLARS ARLRGGGGGV SLSLAIARHL SFESPPPVPP SRPDPEWTDT VDYLDESGAL LSSARGARPA VPGADPTILS GASAHPLPRP AAAARLAALA
101: LRHRSGATLS AALSALPSPP DPALLLLAAA SLPASDPVPL ISLVAWARLQ PWFVPSDDLS SLLAARLPPA THSSELLALF DDTLGLSDLA TFPKTFNAVV
201: SALATHGLLE PAFYCFKRLR DVSFRGLETP AYNALLSLLL TRGLAFKAFE VLDEMATSGC ALDEGTYQLA VPALARAGRI DAARKMFDEM KQREGIGRAP
301: VGVYSVMVDV LAKAGRLDAA MGMYREMVVV GHRVSTAVST AMVEALVRSG KLDAGMELWE EMRRGGLRPS FGLYTMVVEA NARSGRLDMA AKLFGDMEKS
401: GFFPTPATYA CLVEMHASAG QVDAAMRLYH SMANSGTRPG LSTFTALLTM LANKSLLDLA AKVLLEMKAS GFPIEVTASD LLMIYIKDGS TDLALRWLRF
501: MGSAGIRTNN FIIRQLFESC MKTGLYDSAR SLLEAYVAGA AKVDLILYTS ILAHLVRCQD ESSERTIMDI LGTSKHKAHD FMCGLFTGPE QRKQPVLSFV
601: REFFQGIDYD NEESAARYFV NVLLNYLVLM GQMNRARCVW KVAYENKLFA KAIVFDQHIA WSLDVRSLSV GAALVATVHT LHRFRKRMLY YGVVPRRIKL
701: VTGPTLKMVV AQVLASLESP FEVSKVVLRA PGDSVLEWFK KPIVQQFLLN EIPSKADVLM HRLNVMFPSS APEVRSLSIP RSLGMPR
101: LRHRSGATLS AALSALPSPP DPALLLLAAA SLPASDPVPL ISLVAWARLQ PWFVPSDDLS SLLAARLPPA THSSELLALF DDTLGLSDLA TFPKTFNAVV
201: SALATHGLLE PAFYCFKRLR DVSFRGLETP AYNALLSLLL TRGLAFKAFE VLDEMATSGC ALDEGTYQLA VPALARAGRI DAARKMFDEM KQREGIGRAP
301: VGVYSVMVDV LAKAGRLDAA MGMYREMVVV GHRVSTAVST AMVEALVRSG KLDAGMELWE EMRRGGLRPS FGLYTMVVEA NARSGRLDMA AKLFGDMEKS
401: GFFPTPATYA CLVEMHASAG QVDAAMRLYH SMANSGTRPG LSTFTALLTM LANKSLLDLA AKVLLEMKAS GFPIEVTASD LLMIYIKDGS TDLALRWLRF
501: MGSAGIRTNN FIIRQLFESC MKTGLYDSAR SLLEAYVAGA AKVDLILYTS ILAHLVRCQD ESSERTIMDI LGTSKHKAHD FMCGLFTGPE QRKQPVLSFV
601: REFFQGIDYD NEESAARYFV NVLLNYLVLM GQMNRARCVW KVAYENKLFA KAIVFDQHIA WSLDVRSLSV GAALVATVHT LHRFRKRMLY YGVVPRRIKL
701: VTGPTLKMVV AQVLASLESP FEVSKVVLRA PGDSVLEWFK KPIVQQFLLN EIPSKADVLM HRLNVMFPSS APEVRSLSIP RSLGMPR
001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
Arabidopsis Description
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.