Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57615 | Soybean | cytosol | 59.17 | 60.71 |
| VIT_12s0028g00090.t01 | Wine grape | plastid | 63.72 | 59.35 |
| Os04t0612800-01 | Rice | mitochondrion | 61.45 | 58.62 |
| Solyc08g078150.1.1 | Tomato | nucleus | 61.71 | 58.06 |
| PGSC0003DMT400067470 | Potato | mitochondrion | 61.58 | 57.93 |
| KXG27099 | Sorghum | mitochondrion | 61.04 | 57.79 |
| TraesCS2D01G422200.1 | Wheat | mitochondrion | 59.97 | 57.73 |
| Zm00001d002345_P001 | Maize | mitochondrion | 60.37 | 57.31 |
| HORVU2Hr1G099330.11 | Barley | mitochondrion | 59.3 | 57.09 |
| KRG94011 | Soybean | plastid | 62.25 | 56.85 |
| TraesCS2A01G424400.1 | Wheat | mitochondrion | 58.9 | 56.7 |
| TraesCS2B01G444000.1 | Wheat | plastid | 60.37 | 55.68 |
| CDX79321 | Canola | mitochondrion, plastid | 60.78 | 55.03 |
| Bra003609.1-P | Field mustard | mitochondrion, plastid | 60.64 | 54.91 |
| CDX67993 | Canola | mitochondrion, plastid | 59.71 | 54.39 |
| AT1G79490.1 | Thale cress | mitochondrion, plastid | 59.71 | 53.35 |
| GSMUA_Achr11P... | Banana | plastid | 17.0 | 18.98 |
| GSMUA_Achr7P26730_001 | Banana | plastid | 13.25 | 17.43 |
| GSMUA_Achr8P15270_001 | Banana | mitochondrion | 18.74 | 16.63 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | EnsemblPlantsGene:GSMUA_Achr11G18220_001 | EnsemblPlants:GSMUA_Achr11P18220_001 |
| EnsemblPlants:GSMUA_Achr11T18220_001 | InterPro:IPR002625 | InterPro:IPR002885 | InterPro:IPR011990 | UniProt:M0RTA2 | PFAM:PF01535 |
| PFAM:PF13041 | PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF326 | InterPro:Pentatricopeptide_repeat |
| SMART:SM00463 | InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000295D9E5 | SEG:seg |
Description
Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr11G18220_001]
Coordinates
chr11:-:19641867..19644263
Molecular Weight (calculated)
82892.2 Da
IEP (calculated)
9.252
GRAVY (calculated)
0.030
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRLRSLNL SQPLPLFLRH PKTLNPTLRC LSSPSSSQSQ GPLPSSEPAE WTDEIVYLDE SGDVICSGRG LRPAEPGRDA HVLDGGLLRP IPRSAAASKL
101: VELARRWRWG PDLDAHLDRL PFPPDPSLLS SLFDDILKAA TFDDAEPSST SFSSSLNLVV QYLCQASKLE ISFSCFKKLR DAGFREFNTQ TYNSLITLFL
201: CKGLPFKAFE IYESMASSGC SLDASTYDLM VPALAKSGRL DAALRLFQEM KAKEGSGRPG LPIYAALVDS MGKAGRLDAA VGLYQELQSV GYRPSVTMYV
301: SMIESLVKAG KLDAGLKLWN EMKGAGFRPN FGLYTMMVES HARSGRLETA ASIFADMERS GFLPTPSTYA CLIEMHSAAG QVDPAMRLYN SMTNAGLRPG
401: LSTFTSLLSV LANKKLLDLA AKVLLEMKAV GFAVDVNASD VLMIYIKGGS TELALRWLRF MGSAGIRTNN FIIRQLFESC MKAGLYDSAQ PLLETYVGSA
501: AKVDLILYTS ILAHLVRCKD EKNERAIMDI MSSAKHRAHE FMCGLFTGPE QRKKPVLSFV REFFQEIDYE LEESAARYFV NVLLNYLVLM GQMNRARCVW
601: KVAYENKLFP KAIVFDQHIA WSLDVRNLSV GAALVSVVHT LHRFRKRMLY YGVVPRRIKL VTGPTLKMVV AQMLQSVESP FEVSKVVLRA PGDSVLEWFK
701: KPIVQQFLLN EIPSKADVLM HKLNVLFPSS APEVRLLSPP KPLAVSR
101: VELARRWRWG PDLDAHLDRL PFPPDPSLLS SLFDDILKAA TFDDAEPSST SFSSSLNLVV QYLCQASKLE ISFSCFKKLR DAGFREFNTQ TYNSLITLFL
201: CKGLPFKAFE IYESMASSGC SLDASTYDLM VPALAKSGRL DAALRLFQEM KAKEGSGRPG LPIYAALVDS MGKAGRLDAA VGLYQELQSV GYRPSVTMYV
301: SMIESLVKAG KLDAGLKLWN EMKGAGFRPN FGLYTMMVES HARSGRLETA ASIFADMERS GFLPTPSTYA CLIEMHSAAG QVDPAMRLYN SMTNAGLRPG
401: LSTFTSLLSV LANKKLLDLA AKVLLEMKAV GFAVDVNASD VLMIYIKGGS TELALRWLRF MGSAGIRTNN FIIRQLFESC MKAGLYDSAQ PLLETYVGSA
501: AKVDLILYTS ILAHLVRCKD EKNERAIMDI MSSAKHRAHE FMCGLFTGPE QRKKPVLSFV REFFQEIDYE LEESAARYFV NVLLNYLVLM GQMNRARCVW
601: KVAYENKLFP KAIVFDQHIA WSLDVRNLSV GAALVSVVHT LHRFRKRMLY YGVVPRRIKL VTGPTLKMVV AQMLQSVESP FEVSKVVLRA PGDSVLEWFK
701: KPIVQQFLLN EIPSKADVLM HKLNVLFPSS APEVRLLSPP KPLAVSR
001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
Arabidopsis Description
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.