Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G422200.1 | Wheat | mitochondrion | 80.41 | 80.41 |
| TraesCS2A01G424400.1 | Wheat | mitochondrion | 78.22 | 78.22 |
| TraesCS2B01G444000.1 | Wheat | plastid | 80.03 | 76.67 |
| KXG27099 | Sorghum | mitochondrion | 72.68 | 71.48 |
| Os04t0612800-01 | Rice | mitochondrion | 72.04 | 71.39 |
| Zm00001d002345_P001 | Maize | mitochondrion | 71.91 | 70.9 |
| GSMUA_Achr11P... | Banana | mitochondrion | 57.09 | 59.3 |
| KRH57615 | Soybean | cytosol | 50.64 | 53.98 |
| VIT_12s0028g00090.t01 | Wine grape | plastid | 53.48 | 51.75 |
| PGSC0003DMT400067470 | Potato | mitochondrion | 51.93 | 50.76 |
| Solyc08g078150.1.1 | Tomato | nucleus | 51.68 | 50.5 |
| Bra003609.1-P | Field mustard | mitochondrion, plastid | 52.84 | 49.7 |
| KRG94011 | Soybean | plastid | 51.8 | 49.14 |
| CDX79321 | Canola | mitochondrion, plastid | 52.06 | 48.97 |
| AT1G79490.1 | Thale cress | mitochondrion, plastid | 52.06 | 48.33 |
| CDX67993 | Canola | mitochondrion, plastid | 50.9 | 48.17 |
| HORVU0Hr1G012890.2 | Barley | cytosol | 12.5 | 22.4 |
| HORVU2Hr1G122510.2 | Barley | cytosol | 10.57 | 21.52 |
| HORVU5Hr1G124070.6 | Barley | plastid | 15.98 | 17.1 |
| HORVU4Hr1G067600.1 | Barley | nucleus | 14.56 | 16.17 |
| HORVU5Hr1G000760.8 | Barley | mitochondrion | 17.65 | 15.99 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A287J4Y6 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| EnsemblPlantsGene:HORVU2Hr1G099330 | EnsemblPlants:HORVU2Hr1G099330.11 | InterPro:IPR002625 | InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 |
| PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF326 | InterPro:Pentatricopeptide_repeat |
| SMART:SM00463 | InterPro:Smr_dom | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B461DEC | SEG:seg |
Description
No Description!
Coordinates
chrchr2H:+:687351293..687355104
Molecular Weight (calculated)
76388.5 Da
IEP (calculated)
9.140
GRAVY (calculated)
0.083
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLRAGFPHL RRRAAALPLS LAPRRLSSEP PPGGEWIDTV DYLDETGEIL SSAXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXP WFVPSDDLSS IVAARLSPAT HSSDLLSLFD DALLHPQPAL FPKTLNAVVS ALSAHGLLEP
201: AFYCFKRLRD AGFHGLQTTT YNALLSLLLA RGLAFKAFEV LDEMSVAGCE LDKGTYELAV PALARAGRID ASRKLFDEMR QRDGVGPASP GVYSTMVDVL
301: AKSGRLDAAM GMYREMVAVE HRVSTSVSTS MVEGLVKAGK LDAGMELWEE MRRGGLRPSF GLYTMVLEAN ARSGRLDVAA KLFGDMERSG FFPTPATYAC
401: LVEMHASAGN VDVAMKMYHS MANAGTRPGL STFTSLLTML ANKKLLDLAA KVLLEMKASG FPIEVTASDL LMIYIKDGST ELALRWLRFM GSAGIRTNNF
501: IIRQLFESCM KMGLYDSARP LLETYVSAAA KVDMILYTSI LAHLVRCQDE DSERAIMNIL SVSRHKAHDF MCGLFTGPEQ RKKPVLSFVR EFFQGIDYEN
601: EESAARYFVN VLLNYLVLMG QMNRARCVWK VAYENKLFPK AIVFDQHIAW SLDIRNLSVG AALVSTVHTL HRFRKRMLYY GVVPRRIKLV TGPTLKMVVA
701: QVLASLESPF EVSKVVLRAP GDSVLEWFKK PIVQQFLLNE IPSKSDVLMH KLNVMFPSSA PEARSLALPR SLGMTR
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXP WFVPSDDLSS IVAARLSPAT HSSDLLSLFD DALLHPQPAL FPKTLNAVVS ALSAHGLLEP
201: AFYCFKRLRD AGFHGLQTTT YNALLSLLLA RGLAFKAFEV LDEMSVAGCE LDKGTYELAV PALARAGRID ASRKLFDEMR QRDGVGPASP GVYSTMVDVL
301: AKSGRLDAAM GMYREMVAVE HRVSTSVSTS MVEGLVKAGK LDAGMELWEE MRRGGLRPSF GLYTMVLEAN ARSGRLDVAA KLFGDMERSG FFPTPATYAC
401: LVEMHASAGN VDVAMKMYHS MANAGTRPGL STFTSLLTML ANKKLLDLAA KVLLEMKASG FPIEVTASDL LMIYIKDGST ELALRWLRFM GSAGIRTNNF
501: IIRQLFESCM KMGLYDSARP LLETYVSAAA KVDMILYTSI LAHLVRCQDE DSERAIMNIL SVSRHKAHDF MCGLFTGPEQ RKKPVLSFVR EFFQGIDYEN
601: EESAARYFVN VLLNYLVLMG QMNRARCVWK VAYENKLFPK AIVFDQHIAW SLDIRNLSVG AALVSTVHTL HRFRKRMLYY GVVPRRIKLV TGPTLKMVVA
701: QVLASLESPF EVSKVVLRAP GDSVLEWFKK PIVQQFLLNE IPSKSDVLMH KLNVMFPSSA PEARSLALPR SLGMTR
001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF
Arabidopsis Description
EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.