CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94011	Soybean	plastid	95.19	84.72
PGSC0003DMT400067470	Potato	mitochondrion	81.87	75.06
Solyc08g078150.1.1	Tomato	nucleus	81.73	74.94
VIT_12s0028g00090.t01	Wine grape	plastid	81.87	74.31
CDX79321	Canola	mitochondrion, plastid	79.26	69.94
Bra003609.1-P	Field mustard	mitochondrion, plastid	78.57	69.33
CDX67993	Canola	mitochondrion, plastid	77.88	69.15
AT1G79490.1	Thale cress	mitochondrion, plastid	79.4	69.14
GSMUA_Achr11P...	Banana	mitochondrion	60.71	59.17
KXG27099	Sorghum	mitochondrion	59.2	54.63
Os04t0612800-01	Rice	mitochondrion	58.52	54.41
TraesCS2D01G422200.1	Wheat	mitochondrion	57.83	54.25
Zm00001d002345_P001	Maize	mitochondrion	58.1	53.75
TraesCS2A01G424400.1	Wheat	mitochondrion	56.18	52.71
TraesCS2B01G444000.1	Wheat	plastid	58.38	52.47
HORVU2Hr1G099330.11	Barley	mitochondrion	53.98	50.64
KRH04318	Soybean	cytosol	15.52	17.25
KRH36593	Soybean	plastid	16.07	16.88
KRH58221	Soybean	cytosol	15.8	16.15
KRH51188	Soybean	nucleus	14.97	15.91
KRH01964	Soybean	nucleus	15.52	15.87
KRH11577	Soybean	plastid	14.97	15.77
KRH54492	Soybean	mitochondrion	18.82	15.53
KRH56975	Soybean	mitochondrion	18.68	15.53
KRH36594	Soybean	plastid	14.84	15.32
KRH36591	Soybean	plastid	14.29	15.03
KRH63421	Soybean	plastid	18.41	14.92
KRH11579	Soybean	plastid	16.62	11.91
KRH36592	Soybean	plastid	16.35	11.62
KRH11578	Soybean	plastid	15.8	11.14

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EMBL:ACUP02002867	EnsemblPlantsGene:GLYMA_05G072500	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0090305
InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990	UniProt:K7KNC8	EnsemblPlants:KRH57615	ProteinID:KRH57615
ProteinID:KRH57615.1	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812	PFscan:PS50828	PFscan:PS51375
PANTHER:PTHR24015	PANTHER:PTHR24015:SF326	InterPro:Pentatricopeptide_repeat	SMART:SM00463	InterPro:Smr_dom	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00029601BD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:8069457..8071713

Molecular Weight (calculated)

82076.8 Da

IEP (calculated)

8.620

GRAVY (calculated)

0.073

Length

728 amino acids

Sequence
(BLAST)

001: MRCYCHDSRG SKEWTEEIEY LDESGGVIYK GKGVRSVEPG VDDHVMVGEV KKPFVNALAV AKIVEVVKRW KWGPELETQL DKLQFVPNMT HIAQALKVVG
101: DVDACFSLFR WAKRQAWYVP SDDCYVMLFD GLNQKRDFEG IQLLFDEMVG DSADGVSLFA ACNGVIRYLA KAEKLEVSFY CFKKILDVGC KVDTETYNSL
201: ITLFLNKGLP YKAFEMYESM EKAGCSLDGS TYELMIPNLA KSGRLDAAFK LFQEMKVRGF RLGLNVFASL VDSMGKAGRL DSAMKVYMEM RETALRLWDE
301: MRMAGFRPNF GLYTLIIESH AKSGKLEIAM STFLDIEIAG FLPTPSTYAC LLEMHAASGQ IDPAMKLYNS MTNVGLRPGL STYTVLLTLL ANKKLVDVAA
401: KILLEMKAMG YSVDVTASDI LMVYIKEGSV DLALRWLRFM GSSGIRTNNF IMRQLFESCM KSGLYESAKP LLETYVNSAA KVDLILYTSI LAHLVRCQEE
501: KNERHLMSIL SATKHKAHSF MCGLFTGPEH RGQPVLSFVR EFFQGIDYEL EEGAAKYFVN VLLNYLVLMG QINRARCVWK VAYENKLFPK TIVFDQHIAW
601: SLDVRNLSVG AALIAVVHTL HRFRKRMLYY GIVPRRIKLV TGATLKIVIA QMLSSVESPF EVSKVVLRAS GDSVMEWFKK PIVQQFLLNE IPSRSDILMH
701: KLNILFPSSA PEVRSLSPPK PLIAGRAM

Best Arabidopsis Sequence Match ( AT1G79490.1 )
(BLAST)

001: MIRGRTAKVI PRNVIFTLSR SSISESPLIS PSRINPKLAG SFSFNIRLLS YFTVRNGFCP DCSVPRDPNF VGLTTQCRSI VRRFCSEKIG SSESSGWTEE
101: VEYLDESGSV LHSGKGIRSV EPGLDDHVMV GGLKKPYMNA SSVAKIVEVV QRWKWGPELE TQLDKLQFVP NMVHITQSLK IVKEVDAALS LFRWAKKQPW
201: YLPSDECYVV LFDGLNQGRD FVGIQSLFEE MVQDSSSHGD LSFNAYNQVI QYLAKAEKLE VAFCCFKKAQ ESGCKIDTQT YNNLMMLFLN KGLPYKAFEI
301: YESMEKTDSL LDGSTYELII PSLAKSGRLD AAFKLFQQMK ERKLRPSFSV FSSLVDSMGK AGRLDTSMKV YMEMQGFGHR PSATMFVSLI DSYAKAGKLD
401: TALRLWDEMK KSGFRPNFGL YTMIIESHAK SGKLEVAMTV FKDMEKAGFL PTPSTYSCLL EMHAGSGQVD SAMKIYNSMT NAGLRPGLSS YISLLTLLAN
501: KRLVDVAGKI LLEMKAMGYS VDVCASDVLM IYIKDASVDL ALKWLRFMGS SGIKTNNFII RQLFESCMKN GLYDSARPLL ETLVHSAGKV DLVLYTSILA
601: HLVRCQDEDK ERQLMSILSA TKHKAHAFMC GLFTGPEQRK QPVLTFVREF YQGIDYELEE GAARYFVNVL LNYLVLMGQI NRARCVWKVA YENKLFPKAI
701: VFDQHIAWSL DVRNLSVGAA LIAVVHTLHR FRKRMLYYGV VPRRIKLVTG PTLKIVIAQM LSSVESPFEV SKVVLRAPGE LVMEWFKKPI VQQFLLNEIP
801: SRSDILMHKM NVMFPSSAPE LRSMSPPKPL MSSKAF

Arabidopsis Description

EMB2217Pentatricopeptide repeat-containing protein At1g79490, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.