CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36593	Soybean	plastid	51.87	76.05
KRH36592	Soybean	plastid	69.39	68.85
KRH11578	Soybean	plastid	68.01	66.96
VIT_00s0194g00310.t01	Wine grape	cytosol, extracellular	13.78	63.35
KRH36594	Soybean	plastid	43.8	63.12
Solyc09g042290.1.1	Tomato	cytosol	24.9	62.01
CDY22765	Canola	cytosol	31.5	58.08
CDY42535	Canola	cytosol	31.4	57.89
KRH51188	Soybean	nucleus	38.39	56.93
KRH01964	Soybean	nucleus	38.78	55.34
KRH11577	Soybean	plastid	36.02	52.97
VIT_00s0194g00270.t01	Wine grape	plastid	36.42	52.78
KRH36591	Soybean	plastid	35.83	52.6
Solyc11g012670.1.1	Tomato	nucleus	35.24	51.96
PGSC0003DMT400034773	Potato	plastid	34.84	51.38
CDY34461	Canola	plastid	34.65	50.29
CDY32239	Canola	plastid	34.55	50.14
Bra038453.1-P	Field mustard	plastid	34.35	50.07
Bra040576.1-P	Field mustard	plastid	33.56	49.35
AT4G16390.1	Thale cress	plastid	33.66	48.72
HORVU2Hr1G122510.2	Barley	cytosol	17.13	45.67
GSMUA_Achr7P26730_001	Banana	plastid	25.49	45.6
EER92639	Sorghum	plastid	30.61	45.01
TraesCS4A01G079200.1	Wheat	plastid	30.41	44.91
Zm00001d028221_P001	Maize	plastid	30.51	44.86
TraesCS4B01G245000.1	Wheat	plastid	30.22	44.56
Os03t0215900-00	Rice	plastid	29.63	44.53
HORVU4Hr1G067600.1	Barley	nucleus	30.02	43.63
TraesCS4D01G244400.1	Wheat	plastid	29.43	43.46
Zm00001d025264_P001	Maize	mitochondrion, peroxisome	12.5	34.7
KRH58221	Soybean	cytosol	20.77	29.63
KRH04318	Soybean	cytosol	18.7	29.01
KRH57615	Soybean	cytosol	11.91	16.62
KRH54492	Soybean	mitochondrion	13.88	15.99
KRG94011	Soybean	plastid	12.5	15.53
KRH56975	Soybean	mitochondrion	13.19	15.3
KRH63421	Soybean	plastid	13.19	14.92

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0R0G8S1	EMBL:ACUP02009215	EnsemblPlantsGene:GLYMA_15G118300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016787	GO:GO:0031425	GO:GO:0090305	InterPro:IPR002625	InterPro:IPR002885	InterPro:IPR011990
EnsemblPlants:KRH11579	ProteinID:KRH11579	ProteinID:KRH11579.1	PFAM:PF01535	PFAM:PF13041	PFAM:PF13812
PFAM:PF17177	InterPro:PPR_long	PFscan:PS50828	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF437
InterPro:Pentatricopeptide_repeat	SMART:SM00463	SUPFAM:SSF48452	InterPro:Smr_dom	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf
UniParc:UPI00023D308B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:9273007..9276308

Molecular Weight (calculated)

113586.0 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.151

Length

1016 amino acids

Sequence
(BLAST)

0001: MAQPYPLCPS PSASSFSFHS RIPFFTIVPS HSKTLLHAPR FSLQPVNTLQ DAKLDDPDAK SPSLSKNSIW VNPRSPRAKH LQKNSPHARS SSLTKLAKSL
0101: DSCNPTEQHV SEILNVLRDN VSERDAVFIL NTMVNPNTAL LALKYFQPKI NPAKHVVLYN VTLKVLREVK DFEGAEKLFD EMLQRGVEPN LITFSTIISS
0201: ASVCSLPDKA IKWFEKMPSF GVEPDASVGS FMIHAYAHSG KADMALELYD RAKAEKWRVD TVAFSVLIKM CGMLENFDGC LSVYNDMKVL GAKPNMVTYN
0301: TLLYAMGRAK RALDAKAIYE EMISNGFSPN WPTHAALLQA YCKARFCEDA LGVYKEMKKK GMDVNLFLYN LLFDMCADVG CMDEAVEIFE DMKSSGTCQP
0401: DNFTYSCLIN MYSSHLKRTD SLESSNPWEQ QVSTILKGLG DNVSEGDVIF ILNRMVDPNT ASFVLRYFQN MVNFTRDKEV ILYNVVINLF RKSRDFEGAE
0501: KLFDEMLQRG VKPDNITFST LVNCASVSGL PNKAVELFEK MSGFGCEPDG ITCSGMVYAY ARTNNVDKAV NLYDRAKAEN WSLDAVTFST LIKMYSMAGN
0601: YDKCLEVYQE MKVLGVKPNV ATYNTLLGAM LRSKKHRQAK AIHKEMKSNG VSPDFITYAS LLEVYTRAQC SEDALGVYKE MKGNGMDMTA DLYNKLLAMC
0701: ADVGYTDRAV EIFYEMKSSG TCQPDSWTFS SLITIYSRSG KVSEVEGMLN EMIQSGFQPT IFVMTSLIRC YGKAKRTDDV VKIFKQLLDL GIVPNDHFCC
0801: CLLNVLTQTP KEELGKLTDC IEKANTKLGT VVRYLVEEQE SDEGFRKETL ELLNSIDAEV KKPLCNCLID LCVKLNVPER ACGLLDLGLM LEIYKNIQSK
0901: SQTQWSLHLK ELSVGAAMTA LHVWINDLSE ALESGEDLPP LLGINTGQGK HKYSDKGLAS VFESRLKELN APFHEAKAGW FLVTKAAAKL WLESRDSTES
1001: IAGLNFLVLD VPTMAL

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.