Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85855 | Canola | cytosol | 53.92 | 93.7 |
| CDX68166 | Canola | cytosol | 56.96 | 93.47 |
| Bra003787.1-P | Field mustard | cytosol | 53.45 | 92.89 |
| CDX73110 | Canola | cytosol | 30.18 | 86.87 |
| CDY45392 | Canola | mitochondrion | 64.56 | 74.8 |
| Bra015895.1-P | Field mustard | mitochondrion | 64.56 | 74.8 |
| HORVU0Hr1G012890.2 | Barley | cytosol | 37.31 | 73.67 |
| AT1G18900.3 | Thale cress | mitochondrion | 65.38 | 63.09 |
| CDX73109 | Canola | plastid | 30.53 | 62.59 |
| VIT_17s0000g05510.t01 | Wine grape | endoplasmic reticulum | 62.57 | 59.58 |
| PGSC0003DMT400034282 | Potato | mitochondrion | 59.18 | 58.56 |
| KRH54492 | Soybean | mitochondrion | 59.42 | 57.6 |
| KRH63421 | Soybean | plastid | 59.18 | 56.35 |
| KRH56975 | Soybean | mitochondrion | 57.66 | 56.28 |
| Solyc03g113380.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid | 58.95 | 54.6 |
| EES17501 | Sorghum | mitochondrion | 54.15 | 54.28 |
| Zm00001d031217_P003 | Maize | mitochondrion | 53.22 | 53.34 |
| TraesCS5A01G004000.1 | Wheat | mitochondrion | 52.75 | 53.12 |
| TraesCS5D01G012800.1 | Wheat | mitochondrion | 52.51 | 52.76 |
| TraesCSU01G073400.1 | Wheat | mitochondrion | 52.51 | 52.7 |
| Os12t0638900-01 | Rice | mitochondrion | 52.87 | 52.62 |
| HORVU5Hr1G000760.8 | Barley | mitochondrion | 52.16 | 52.04 |
| GSMUA_Achr8P15270_001 | Banana | mitochondrion | 51.11 | 51.9 |
| AT1G79490.1 | Thale cress | mitochondrion, plastid | 17.78 | 18.18 |
| AT5G46580.1 | Thale cress | plastid | 14.97 | 18.0 |
| AT4G16390.1 | Thale cress | plastid | 13.92 | 16.95 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:843814 | ProteinID:AAD55301.1 | ProteinID:AEE35629.1 | ProteinID:ANM61095.1 |
| ProteinID:ANM61096.1 | ProteinID:ANM61097.1 | ArrayExpress:AT1G74750 | EnsemblPlantsGene:AT1G74750 | RefSeq:AT1G74750 | TAIR:AT1G74750 |
| RefSeq:AT1G74750-TAIR-G | EnsemblPlants:AT1G74750.2 | Unigene:At.52517 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0043231 | GO:GO:0090305 | InterPro:IPR002625 | InterPro:IPR002885 |
| InterPro:IPR011990 | RefSeq:NP_001319382.1 | RefSeq:NP_001323334.1 | RefSeq:NP_001323335.1 | RefSeq:NP_177613.1 | PFAM:PF01535 |
| PFAM:PF12854 | PFAM:PF13041 | PFscan:PS50828 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF268 |
| InterPro:Pentatricopeptide_repeat | UniProt:Q9SSF9 | SMART:SM00463 | SUPFAM:SSF160443 | InterPro:Smr_dom | InterPro:Smr_dom_sf |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A3BD8 | SEG:seg | : | : |
Description
Pentatricopeptide repeat-containing protein At1g74750 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSF9]
Coordinates
chr1:+:28085753..28089642
Molecular Weight (calculated)
94714.6 Da
IEP (calculated)
8.496
GRAVY (calculated)
-0.265
Length
855 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRAKHISNL SSSARSFFLS GSRPSAADGN SCTCAEDESG VSKRQQIRTE VVQTGKRASN LAAGLAGSIL PVEAGKPLVV PKTVEHFTRP SLLPQHVSSP
101: ALPGKADSVN HASAIIKEDV GVPIGDQIFK AGIGNVNLLS DIANYKIPLS DGTEVVGLPK SCMVDPTRPI SGVKSSNVKV IRREHLAKVY PRSADRVPIN
201: SSPGTKQASN DVAGKSFEAH DLLSNNVSGK RKIMPQRPYT DSTRYASGGC DYSVHSSDDR TIISSVEGFG KPSREMMKVT PRTAPTPRQH CNPGYVVENV
301: SSILRRFKWG HAAEEALHNF GFRMDAYQAN QVLKQMDNYA NALGFFYWLK RQPGFKHDGH TYTTMVGNLG RAKQFGEINK LLDEMVRDGC KPNTVTYNRL
401: IHSYGRANYL KEAMNVFNQM QEAGCEPDRV TYCTLIDIHA KAGFLDIAMD MYQRMQEAGL SPDTFTYSVI INCLGKAGHL PAAHRLFCEM VGQGCTPNLV
501: TFNIMIALHA KARNYETALK LYRDMQNAGF QPDKVTYSIV MEVLGHCGFL EEAEGVFAEM QRKNWVPDEP VYGLLVDLWG KAGNVDKAWQ WYQAMLQAGL
601: RPNVPTCNSL LSTFLRVHRM SEAYNLLQSM LALGLHPSLQ TYTLLLSCCT DARSNFDMGF CGQLMAVSGH PAHMFLLKMP PAGPDGQKVR DHVSNFLDFM
701: HSEDRESKRG LMDAVVDFLH KSGLKEEAGS VWEVAAGKNV YPDALREKSY SYWLINLHVM SEGTAVIALS RTLAWFRKQM LVSGDCPSRI DIVTGWGRRS
801: RVTGTSMVRQ AVEELLNIFN FPFFTENGNS GCFVGSGEPL KNWLLESYVE RMHLL
101: ALPGKADSVN HASAIIKEDV GVPIGDQIFK AGIGNVNLLS DIANYKIPLS DGTEVVGLPK SCMVDPTRPI SGVKSSNVKV IRREHLAKVY PRSADRVPIN
201: SSPGTKQASN DVAGKSFEAH DLLSNNVSGK RKIMPQRPYT DSTRYASGGC DYSVHSSDDR TIISSVEGFG KPSREMMKVT PRTAPTPRQH CNPGYVVENV
301: SSILRRFKWG HAAEEALHNF GFRMDAYQAN QVLKQMDNYA NALGFFYWLK RQPGFKHDGH TYTTMVGNLG RAKQFGEINK LLDEMVRDGC KPNTVTYNRL
401: IHSYGRANYL KEAMNVFNQM QEAGCEPDRV TYCTLIDIHA KAGFLDIAMD MYQRMQEAGL SPDTFTYSVI INCLGKAGHL PAAHRLFCEM VGQGCTPNLV
501: TFNIMIALHA KARNYETALK LYRDMQNAGF QPDKVTYSIV MEVLGHCGFL EEAEGVFAEM QRKNWVPDEP VYGLLVDLWG KAGNVDKAWQ WYQAMLQAGL
601: RPNVPTCNSL LSTFLRVHRM SEAYNLLQSM LALGLHPSLQ TYTLLLSCCT DARSNFDMGF CGQLMAVSGH PAHMFLLKMP PAGPDGQKVR DHVSNFLDFM
701: HSEDRESKRG LMDAVVDFLH KSGLKEEAGS VWEVAAGKNV YPDALREKSY SYWLINLHVM SEGTAVIALS RTLAWFRKQM LVSGDCPSRI DIVTGWGRRS
801: RVTGTSMVRQ AVEELLNIFN FPFFTENGNS GCFVGSGEPL KNWLLESYVE RMHLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.