Factsheet for TraesCS2D01G443500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0596300-01	Rice	plastid	75.26	72.84
EES12774	Sorghum	plastid	73.21	71.39
HORVU2Hr1G102880.1	Barley	cytosol, nucleus, plastid	87.5	69.43
Zm00001d026211_P001	Maize	plastid	71.17	67.23
GSMUA_Achr8P14670_001	Banana	cytosol	45.92	55.05
VIT_02s0012g02240.t01	Wine grape	plastid	50.51	49.13
Solyc08g076090.2.1	Tomato	nucleus, plastid	48.47	47.26
PGSC0003DMT400024037	Potato	plastid	47.7	46.52
KRH39607	Soybean	golgi	47.45	45.59
KRH74317	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.19	45.57
CDY29940	Canola	plastid	45.66	44.64
Bra033851.1-P	Field mustard	plastid	45.41	44.39
CDY35549	Canola	plastid	45.41	44.28
AT1G32160.1	Thale cress	nucleus, plastid	44.39	42.86
TraesCS4D01G050700.1	Wheat	plastid	38.27	36.59
TraesCS1D01G398600.1	Wheat	mitochondrion	26.28	26.34

Protein Annotations

EnsemblPlants:TraesCS2D01G443500.1	EnsemblPlantsGene:TraesCS2D01G443500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:At3g17800-like	InterPro:DUF760	PANTHER:PTHR31808
PANTHER:PTHR31808:SF6	PFAM:PF05542	SEG:seg	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:554431373..554433915

Molecular Weight (calculated)

44064.6 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.411

Length

392 amino acids

Sequence
(BLAST)

001: MSSAWADAAL LLASPSPSCS PLARPRYGRL RKGFPCTTRS KAGFQINHYQ ARSLKVEAKM DSGDGETQLA PVKFETPSGQ LLAQILQSQP HLIPVTVDQQ
101: LENLTAEKIA QKEKAAKVPE DLLYKRIAEV KEKERQNTLE EIIYCWILFK FMENDIQMTP ALSSSGGPVR DVSSLPNQEY KLQSIHSQDA LEMIQNHLNL
201: IMGEQAAAPL DTVVEISNLN LGKLYAASIM YGYFLKRVDE RFQLEKTMKT LPPSLNEKLF TERDIKPNPF MDMESLVRMT PDGEMADVEE DEETNPNKLR
301: SYVSRLDADT LQRYATIRSK ESVSLIEKQT QALFGRPDIK VLDDGSVNAK DGKTVTLTFT ELTHLVLEAA GFGAFLWEAE SHVESKYHFV NS

Best Arabidopsis Sequence Match ( AT1G32160.1 )
(BLAST)

001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA

Arabidopsis Description

At1g32160/F3C3_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVR1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.