Factsheet for Zm00001d026211_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12774	Sorghum	plastid	82.17	84.83
Os04t0596300-01	Rice	plastid	75.66	77.53
TraesCS2D01G443500.1	Wheat	plastid	67.23	71.17
HORVU2Hr1G102880.1	Barley	cytosol, nucleus, plastid	66.27	55.67
GSMUA_Achr8P14670_001	Banana	cytosol	43.13	54.74
VIT_02s0012g02240.t01	Wine grape	plastid	47.71	49.13
Solyc08g076090.2.1	Tomato	nucleus, plastid	45.78	47.26
PGSC0003DMT400024037	Potato	plastid	45.3	46.77
KRH74317	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.54	46.55
CDY35549	Canola	plastid	45.06	46.52
Bra033851.1-P	Field mustard	plastid	44.82	46.38
CDY29940	Canola	plastid	44.82	46.38
KRH39607	Soybean	golgi	45.54	46.32
AT1G32160.1	Thale cress	nucleus, plastid	44.1	45.07
Zm00001d033787_P001	Maize	plastid	38.55	37.83
Zm00001d013411_P002	Maize	plastid	37.35	37.26
Zm00001d049232_P002	Maize	mitochondrion	26.02	27.69

Protein Annotations

EnsemblPlants:Zm00001d026211_P001	EnsemblPlants:Zm00001d026211_T001	EnsemblPlantsGene:Zm00001d026211	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:At3g17800-like	InterPro:DUF760
PANTHER:PTHR31808	PANTHER:PTHR31808:SF6	PFAM:PF05542	ProteinID:AQK45844.1	SEG:seg	UniParc:UPI000845742C
UniProt:A0A1D6JDE2	MapMan:35.1	:	:	:	:

Description

UV-B-induced protein chloroplastic

Coordinates

chr10:-:140995440..141000793

Molecular Weight (calculated)

46456.4 Da

IEP (calculated)

5.961

GRAVY (calculated)

-0.309

Length

415 amino acids

Sequence
(BLAST)

001: MPAWAEAALV LASPSPATAS STTSSCGARP RAAVGSVRLF CKSAGATCYS VAVLAYWGFP CSIRSKAGFQ IHNYRTRMFK IKAKAESGDG YTRLAPLRFE
101: SPSGQLLIQI LQSHPHLIPA TVDQQLENLQ SEKSAQSEEA SKVPQDLLYK RIAEVKEKER QNALEEIIYC WVTYRFMEND IYMTPALSPG GGPVRDISAL
201: PNQEDKLRNI HSADAFEMIQ NHLNLIMGEK IASPPDTVVE ISNLNLGKLY AASIMYGYFL KRVDERFQLE KTMKTLPPKP NQQIVFENLQ PNPFWDMESL
301: VQITPDGEEI SLDDEKSNPN KLRSYVSQLD ADTLQRYATI RSKEAVSLIE KQTQALFGRP DIKVLDDGSV NAKDGRMITI TFTELNHLVL EAVAFGSFLW
401: EAESYVESKY HFVNS

Best Arabidopsis Sequence Match ( AT1G32160.1 )
(BLAST)

001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA

Arabidopsis Description

At1g32160/F3C3_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVR1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.