Factsheet for Zm00001d049232_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0456100-01	Rice	mitochondrion	72.82	73.58
TraesCS1B01G418600.1	Wheat	mitochondrion	69.49	69.31
TraesCS1D01G398600.1	Wheat	mitochondrion	68.46	68.29
TraesCS1A01G390400.1	Wheat	mitochondrion	68.46	68.29
HORVU1Hr1G086110.1	Barley	plastid	68.72	64.11
VIT_00s2037g00010.t01	Wine grape	cytosol	12.56	45.79
VIT_00s0360g00020.t01	Wine grape	mitochondrion	27.95	44.49
Bra037475.1-P	Field mustard	plastid	37.44	42.94
CDX86293	Canola	plastid	37.44	42.94
CDX85350	Canola	plastid	36.41	41.76
PGSC0003DMT400022517	Potato	mitochondrion	25.9	40.56
AT5G48590.1	Thale cress	plastid	35.38	40.12
CDY34905	Canola	plastid	34.62	39.47
AT3G07310.1	Thale cress	plastid	37.18	39.4
Bra029638.1-P	Field mustard	plastid	36.41	38.59
CDY28064	Canola	plastid	36.41	38.48
Bra040372.1-P	Field mustard	plastid	34.36	38.18
CDY60823	Canola	plastid	34.1	37.78
CDY24630	Canola	plastid	36.15	37.6
PGSC0003DMT400053202	Potato	cytosol	27.69	37.37
PGSC0003DMT400084936	Potato	cytosol	28.46	37.12
KRH46625	Soybean	plastid	35.38	36.41
PGSC0003DMT400022519	Potato	plastid	36.41	36.41
KRG99623	Soybean	plastid	34.62	36.29
Solyc09g057580.2.1	Tomato	plastid	19.74	36.15
Solyc06g007550.1.1	Tomato	cytosol	25.9	35.94
KRH07429	Soybean	plastid	35.38	35.57
KRH66142	Soybean	plastid	35.13	34.86
Solyc06g007560.1.1	Tomato	plastid	29.49	31.77
Zm00001d033787_P001	Maize	plastid	30.77	28.37
Zm00001d013411_P002	Maize	plastid	30.26	28.37
Zm00001d026211_P001	Maize	plastid	27.69	26.02

Protein Annotations

EMBL:BT039109	EnsemblPlants:Zm00001d049232_P002	EnsemblPlants:Zm00001d049232_T002	EnsemblPlantsGene:Zm00001d049232	InterPro:At3g17800-like	InterPro:DUF760
PANTHER:PTHR31808	PANTHER:PTHR31808:SF2	PFAM:PF05542	ProteinID:AQK49902.1	ProteinID:AQK49903.1	SEG:seg
UniParc:UPI00017B74BB	UniProt:B4FPS1	MapMan:35.1	:	:	:

Description

UV-B-induced protein chloroplastic

Coordinates

chr4:+:21985960..21989985

Molecular Weight (calculated)

44339.4 Da

IEP (calculated)

8.468

GRAVY (calculated)

-0.284

Length

390 amino acids

Sequence
(BLAST)

001: MAGLRPRAAV ASNCLRPAIR RGARHASGAA FGYYTCWQLQ GNILNWRSIS ATKKLWSTVA SAKPDDSKFE SVDAPLEPQT CEGSFLCGLL KNLPHIFLAA
101: AAKQLQELSY QREESLKRWE HSIGSKEDCL HRRIAELKEH ECQRAIEDVM YMLIVYKFFK IEVPMVPNLS KLISNRRLQL WPPRETDLES IHGPEVLELI
201: REHLTSIIRW VHRNGPKINR STLRIKRLQF VRIYSASIMY GYFLKSVSIR HRLELTLTRS EGVPPIQFLN AQLTNKQEQE GAIGGSSEAS SSLRPSSVVN
301: PHDLRGYIMG FDPKTLQLCA KLRSSEASNL IERHSWALFG GDMELSQEND EAVILDPSSL KRLLLEAIAF GSFLWDVEDY VDEIFKLSDS

Best Arabidopsis Sequence Match ( AT3G07310.1 )
(BLAST)

001: MDSCLSNQTA LQFLPSRSRR QSGDGGGGFV IPAKRKIQYS SMVVVAAAGQ SRCEPGSSLN APLEPRSAQG RFLRSVLLNK RQLFHYAAAD ELKQLADDRE
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI

Arabidopsis Description

F21O3.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9S7A6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.