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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • nucleus 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra009783.1-P
Bra020466.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60823 Canola plastid 99.15 98.86
CDY34905 Canola plastid 94.02 96.49
Bra029638.1-P Field mustard plastid 76.92 73.37
AT3G07310.1 Thale cress plastid 76.35 72.83
Bra037475.1-P Field mustard plastid 62.39 64.41
VIT_00s2037g00010.t01 Wine grape cytosol 14.24 46.73
PGSC0003DMT400022517 Potato mitochondrion 32.48 45.78
VIT_00s0360g00020.t01 Wine grape mitochondrion 31.91 45.71
Solyc09g057580.2.1 Tomato plastid 27.35 45.07
PGSC0003DMT400053202 Potato cytosol 35.61 43.25
PGSC0003DMT400022519 Potato plastid 47.58 42.82
KRG99623 Soybean plastid 45.3 42.74
KRH46625 Soybean plastid 45.58 42.22
KRH07429 Soybean plastid 45.87 41.49
PGSC0003DMT400084936 Potato cytosol 35.33 41.47
Solyc06g007550.1.1 Tomato cytosol 32.19 40.21
KRH66142 Soybean plastid 44.44 39.69
Solyc06g007560.1.1 Tomato plastid 39.03 37.85
Zm00001d049232_P002 Maize mitochondrion 38.18 34.36
TraesCS1A01G390400.1 Wheat mitochondrion 38.18 34.27
TraesCS1B01G418600.1 Wheat mitochondrion 38.18 34.27
Os11t0456100-01 Rice mitochondrion 37.32 33.94
TraesCS1D01G398600.1 Wheat mitochondrion 37.61 33.76
HORVU1Hr1G086110.1 Barley plastid 39.03 32.78
Bra001683.1-P Field mustard plastid 31.91 27.45
Bra032255.1-P Field mustard plastid 31.62 27.27
Bra022245.1-P Field mustard plastid 31.62 26.75
Bra033851.1-P Field mustard plastid 27.64 24.19
Protein Annotations
EnsemblPlants:Bra040372.1EnsemblPlants:Bra040372.1-PEnsemblPlantsGene:Bra040372InterPro:At3g17800-likeInterPro:DUF760PANTHER:PTHR31808
PANTHER:PTHR31808:SF2PFAM:PF05542UniParc:UPI0002544928UniProt:M4FGZ4MapMan:35.1:
Description
AT3G07310 (E=1e-107) | unknown protein
Coordinates
chrA01:+:27954163..27955559
Molecular Weight (calculated)
39859.4 Da
IEP (calculated)
9.284
GRAVY (calculated)
-0.275
Length
351 amino acids
Sequence
(BLAST)
001: MDSCLSNQAS LSFLPTRSRR QRGDRSGFVL PAMRKVQYRP MVMVATAGQN SYWPGSSLNA PLKPRTSQGR FLIRLLLNKR HLFHYAAADE LRLLADNREA
101: ALARMSLSSG SDEASLHRRI AQLMERYCKT AVQDIMYMLI LYKYSEIGVS LAPKLSRCIH NGRLETWPKK DRELESIHSC DALELIKEHV NAVIGLRANS
201: CLKEKTQIQK LHLTKVYVAS ILCGYFLKSA SLRHQLECSL PDLHGSGYVN GPILVSTKEH LRHYITGFDP ETMQRCAKPR TVEARSLIKK QCLALFGMED
301: SDETILTSYL SLKRLVLEAV AFGTFLWDTE LYVDGAYKLN ENAEEQENRS I
Best Arabidopsis Sequence Match ( AT3G07310.1 )
(BLAST)
001: MDSCLSNQTA LQFLPSRSRR QSGDGGGGFV IPAKRKIQYS SMVVVAAAGQ SRCEPGSSLN APLEPRSAQG RFLRSVLLNK RQLFHYAAAD ELKQLADDRE
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI
Arabidopsis Description
F21O3.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9S7A6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.