Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra009783.1-P | |
Bra020466.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G07310.1 | Bra009783.1-P | AT5G24660.1 | 21798944 |
AT3G07310.1 | Bra020466.1-P | AT5G24660.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY60823 | Canola | plastid | 99.15 | 98.86 |
CDY34905 | Canola | plastid | 94.02 | 96.49 |
Bra029638.1-P | Field mustard | plastid | 76.92 | 73.37 |
AT3G07310.1 | Thale cress | plastid | 76.35 | 72.83 |
Bra037475.1-P | Field mustard | plastid | 62.39 | 64.41 |
VIT_00s2037g00010.t01 | Wine grape | cytosol | 14.24 | 46.73 |
PGSC0003DMT400022517 | Potato | mitochondrion | 32.48 | 45.78 |
VIT_00s0360g00020.t01 | Wine grape | mitochondrion | 31.91 | 45.71 |
Solyc09g057580.2.1 | Tomato | plastid | 27.35 | 45.07 |
PGSC0003DMT400053202 | Potato | cytosol | 35.61 | 43.25 |
PGSC0003DMT400022519 | Potato | plastid | 47.58 | 42.82 |
KRG99623 | Soybean | plastid | 45.3 | 42.74 |
KRH46625 | Soybean | plastid | 45.58 | 42.22 |
KRH07429 | Soybean | plastid | 45.87 | 41.49 |
PGSC0003DMT400084936 | Potato | cytosol | 35.33 | 41.47 |
Solyc06g007550.1.1 | Tomato | cytosol | 32.19 | 40.21 |
KRH66142 | Soybean | plastid | 44.44 | 39.69 |
Solyc06g007560.1.1 | Tomato | plastid | 39.03 | 37.85 |
Zm00001d049232_P002 | Maize | mitochondrion | 38.18 | 34.36 |
TraesCS1A01G390400.1 | Wheat | mitochondrion | 38.18 | 34.27 |
TraesCS1B01G418600.1 | Wheat | mitochondrion | 38.18 | 34.27 |
Os11t0456100-01 | Rice | mitochondrion | 37.32 | 33.94 |
TraesCS1D01G398600.1 | Wheat | mitochondrion | 37.61 | 33.76 |
HORVU1Hr1G086110.1 | Barley | plastid | 39.03 | 32.78 |
Bra001683.1-P | Field mustard | plastid | 31.91 | 27.45 |
Bra032255.1-P | Field mustard | plastid | 31.62 | 27.27 |
Bra022245.1-P | Field mustard | plastid | 31.62 | 26.75 |
Bra033851.1-P | Field mustard | plastid | 27.64 | 24.19 |
Protein Annotations
EnsemblPlants:Bra040372.1 | EnsemblPlants:Bra040372.1-P | EnsemblPlantsGene:Bra040372 | InterPro:At3g17800-like | InterPro:DUF760 | PANTHER:PTHR31808 |
PANTHER:PTHR31808:SF2 | PFAM:PF05542 | UniParc:UPI0002544928 | UniProt:M4FGZ4 | MapMan:35.1 | : |
Description
AT3G07310 (E=1e-107) | unknown protein
Coordinates
chrA01:+:27954163..27955559
Molecular Weight (calculated)
39859.4 Da
IEP (calculated)
9.284
GRAVY (calculated)
-0.275
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSCLSNQAS LSFLPTRSRR QRGDRSGFVL PAMRKVQYRP MVMVATAGQN SYWPGSSLNA PLKPRTSQGR FLIRLLLNKR HLFHYAAADE LRLLADNREA
101: ALARMSLSSG SDEASLHRRI AQLMERYCKT AVQDIMYMLI LYKYSEIGVS LAPKLSRCIH NGRLETWPKK DRELESIHSC DALELIKEHV NAVIGLRANS
201: CLKEKTQIQK LHLTKVYVAS ILCGYFLKSA SLRHQLECSL PDLHGSGYVN GPILVSTKEH LRHYITGFDP ETMQRCAKPR TVEARSLIKK QCLALFGMED
301: SDETILTSYL SLKRLVLEAV AFGTFLWDTE LYVDGAYKLN ENAEEQENRS I
101: ALARMSLSSG SDEASLHRRI AQLMERYCKT AVQDIMYMLI LYKYSEIGVS LAPKLSRCIH NGRLETWPKK DRELESIHSC DALELIKEHV NAVIGLRANS
201: CLKEKTQIQK LHLTKVYVAS ILCGYFLKSA SLRHQLECSL PDLHGSGYVN GPILVSTKEH LRHYITGFDP ETMQRCAKPR TVEARSLIKK QCLALFGMED
301: SDETILTSYL SLKRLVLEAV AFGTFLWDTE LYVDGAYKLN ENAEEQENRS I
001: MDSCLSNQTA LQFLPSRSRR QSGDGGGGFV IPAKRKIQYS SMVVVAAAGQ SRCEPGSSLN APLEPRSAQG RFLRSVLLNK RQLFHYAAAD ELKQLADDRE
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI
Arabidopsis Description
F21O3.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9S7A6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.