Factsheet for Bra033851.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35549	Canola	plastid	99.5	99.25
AT1G32160.1	Thale cress	nucleus, plastid	80.8	79.8
VIT_02s0012g02240.t01	Wine grape	plastid	57.61	57.32
GSMUA_Achr8P14670_001	Banana	cytosol	46.13	56.57
KRH74317	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.11	54.43
Solyc08g076090.2.1	Tomato	nucleus, plastid	54.11	53.98
KRH39607	Soybean	golgi	54.11	53.19
PGSC0003DMT400024037	Potato	plastid	52.12	51.99
Os04t0596300-01	Rice	plastid	45.89	45.43
TraesCS2D01G443500.1	Wheat	plastid	44.39	45.41
Zm00001d026211_P001	Maize	plastid	46.38	44.82
EES12774	Sorghum	plastid	44.64	44.53
Bra001683.1-P	Field mustard	plastid	41.15	40.44
Bra032255.1-P	Field mustard	plastid	40.15	39.56
Bra022245.1-P	Field mustard	plastid	40.9	39.52
HORVU2Hr1G102880.1	Barley	cytosol, nucleus, plastid	44.64	36.23
Bra029638.1-P	Field mustard	plastid	26.68	29.08
Bra037475.1-P	Field mustard	plastid	24.19	28.53
Bra040372.1-P	Field mustard	plastid	24.19	27.64

Protein Annotations

EnsemblPlants:Bra033851.1	EnsemblPlants:Bra033851.1-P	EnsemblPlantsGene:Bra033851	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:At3g17800-like	InterPro:DUF760
PANTHER:PTHR31808	PANTHER:PTHR31808:SF6	PFAM:PF05542	SEG:seg	UniParc:UPI0002548133	UniProt:M4EYF9
MapMan:35.1	:	:	:	:	:

Description

AT1G32160 (E=1e-180) | unknown protein

Coordinates

chrA05:-:14474023..14475428

Molecular Weight (calculated)

45368.9 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.452

Length

401 amino acids

Sequence
(BLAST)

001: MQAIGSYGCL CFKHYHSLSK FLSPPSTSPS LLPQRCHSFC IPKLGSSSNN AENGRGRGVT VRASGEDDNF APIAPVELES PVGQLLDQIL RTHPHLLPVT
101: VDQQLDKLST ENDNLKAEPS SSQDILSKRI SEVKDKEKRK TLAEIIYCLV VHRFVEKEIT MIPQIKPTSD PAGRIDLWPN QEEKLEVIHS AEAFEMIQSH
201: LSSVLGDRTA VGPLSSIVQI SKIKLGKLYA ASVMYGYFLR RIDQRYQLER TMNTLPKRPD KTRERYEEPS PPYPLWDPDS LIRIQPEEYD PDEYAIQRNE
301: GESSSYGLRS YVTYLDSDTL QRYATIRSKE AMSLIEKQTQ ALFGRPDIRI LEDGKLDTSN DEVLSLSFSG LAMLVLEAVT FGSFLWDAES YVESKYHFLK
401: A

Best Arabidopsis Sequence Match ( AT1G32160.1 )
(BLAST)

001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA

Arabidopsis Description

At1g32160/F3C3_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVR1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.