Factsheet for HORVU2Hr1G102880.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G443500.1	Wheat	plastid	69.43	87.5
Os04t0596300-01	Rice	plastid	58.3	71.11
EES12774	Sorghum	plastid	54.45	66.92
Zm00001d026211_P001	Maize	plastid	55.67	66.27
GSMUA_Achr8P14670_001	Banana	cytosol	36.23	54.74
VIT_02s0012g02240.t01	Wine grape	plastid	39.47	48.39
Solyc08g076090.2.1	Tomato	nucleus, plastid	37.45	46.02
KRH39607	Soybean	golgi	37.85	45.83
KRH74317	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.45	45.57
PGSC0003DMT400024037	Potato	plastid	37.04	45.52
CDY29940	Canola	plastid	36.44	44.89
Bra033851.1-P	Field mustard	plastid	36.23	44.64
AT1G32160.1	Thale cress	nucleus, plastid	36.64	44.58
CDY35549	Canola	plastid	36.23	44.53
HORVU4Hr1G008300.1	Barley	plastid	30.77	37.25
HORVU1Hr1G086110.1	Barley	plastid	21.26	25.12

Protein Annotations

EnsemblPlants:HORVU2Hr1G102880.1	EnsemblPlantsGene:HORVU2Hr1G102880	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:At3g17800-like	InterPro:DUF760	PANTHER:PTHR31808
PANTHER:PTHR31808:SF6	PFAM:PF05542	SEG:seg	UniParc:UPI000B464B99	UniProt:A0A287J8S3	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:+:698444733..698447746

Molecular Weight (calculated)

55380.3 Da

IEP (calculated)

9.449

GRAVY (calculated)

-0.524

Length

494 amino acids

Sequence
(BLAST)

001: PRVAHTEKPD SLVWRTKLPT VPHAHGSRAS LRLAWRKREG RARHRHTHTL TLAPDRKRSA PRSPPSLVST APPPSNLGSP KQRTESPSSL LCRPHPLSAR
101: ATMSSAWADA ALLLASPSPS CSPLARPRHG RLRKGFPYTS RSKAGFQINH YQARSLKVKA KMESGDGEAQ LAPVKFETPS GQLLAQILQS QPHLIPVTVD
201: QQLENLTAEK IAQKEKAAKV PEDLLYKRIA EVKEKERQNT LEEIIYCWIL FKFMENDISM TPALSPSGGP VRDISSLPNQ EYKLQSIHSQ DALEMIQNHL
301: NLIMGEQAAA PLDTVVEISN LNLGKLYAAS IMYGYFLKRV DERFQLEKTM KTLPPSLNEK LFTERDIKPN PFMDMESLVR MTPDGEMVDV EEDEETNPNK
401: LRSYVSRLDA DTLQRYATIR SKESVSLIEK QTQALFGRPD IKVLDDGSVN AKDGKTVTLT FTELTHLVLE AAGFGAFLWE AESHVESKYH FVNS

Best Arabidopsis Sequence Match ( AT1G32160.1 )
(BLAST)

001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA

Arabidopsis Description

At1g32160/F3C3_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVR1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.