Factsheet for GSMUA_Achr8P14670_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g02240.t01	Wine grape	plastid	66.97	54.34
KRH74317	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.02	47.54
KRH39607	Soybean	golgi	59.02	47.3
Solyc08g076090.2.1	Tomato	nucleus, plastid	57.49	46.77
Bra033851.1-P	Field mustard	plastid	56.57	46.13
TraesCS2D01G443500.1	Wheat	plastid	55.05	45.92
CDY35549	Canola	plastid	56.27	45.77
PGSC0003DMT400024037	Potato	plastid	56.27	45.77
Os04t0596300-01	Rice	plastid	56.57	45.68
CDY29940	Canola	plastid	55.96	45.64
AT1G32160.1	Thale cress	nucleus, plastid	55.35	44.58
EES12774	Sorghum	plastid	54.13	44.03
Zm00001d026211_P001	Maize	plastid	54.74	43.13
GSMUA_Achr1P22120_001	Banana	plastid	47.71	40.62
GSMUA_Achr8P30820_001	Banana	mitochondrion	48.32	37.98
HORVU2Hr1G102880.1	Barley	cytosol, nucleus, plastid	54.74	36.23

Protein Annotations

EnsemblPlants:GSMUA_Achr8P14670_001	EnsemblPlants:GSMUA_Achr8T14670_001	EnsemblPlantsGene:GSMUA_Achr8G14670_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	InterPro:At3g17800-like	InterPro:DUF760
PANTHER:PTHR31808	PANTHER:PTHR31808:SF6	PFAM:PF05542	SEG:seg	UniParc:UPI0002950ACC	UniProt:M0TQH0
MapMan:35.1	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G14670_001]

Coordinates

chr8:+:12043838..12047647

Molecular Weight (calculated)

37639.2 Da

IEP (calculated)

4.809

GRAVY (calculated)

-0.322

Length

327 amino acids

Sequence
(BLAST)

001: MQTHPHLLPA AIDQQLERLQ SDIDAENAKT PVASQDLPLY RRIAEVKEKE RHKALEEIIY CLIVQKFMEK EIDMIPTVTT STDPTYRVDS WPNQEHKLES
101: MHSPDALEMI QSHLTLILGE RVGGPLNTVA QISKLKLGKL YAASIMYGYF LKRVDERYQL ERTMKTLPTK PRGQRIFDEL KPNPLWDLES MVQISSDDDD
201: FDGDETKPYR LRSYVMYLDA ETLQRYATIR SKESISLIEK QTQALFGRPD IRIADDGSLE TPNDEVVGIT FSGLTMLVLE AVAFGTFLWE AEGYVESKFH
301: FLSMCERPDI HNTYLSIIIL WSSFVLI

Best Arabidopsis Sequence Match ( AT1G32160.1 )
(BLAST)

001: MQAIGSSHGR RLCFNHYLSD SFSKFLSPSS SPSLLPQRCH SFCIPKLGSS STNENGRGRS VTVRASGDED SNENFAPLAP VELESPVGQL LEQILRTHPH
101: LLPVTVDEQL EKFAAESESR KADSSSTQDI LQKRISEVRD KERRKTLAEI IYCLVVHRFV EKGISMIPRI KPTSDPAGRI DLWPNQEEKL EVIHSADAFE
201: MIQSHLSSVL GDGPAVGPLS SIVQIGKIKL GKLYAASAMY GYFLRRVDQR YQLERTMNTL PKRPEKTRER FEEPSPPYPL WDPDSLIRIQ PEEYDPDEYA
301: IQRNEDESSS YGLRSYVTYL DSDTLQRYAT IRSKEAMTLI EKQTQALFGR PDIRILEDGK LDTSNDEVLS LSVSGLAMLV LEAVAFGSFL WDSESYVESK
401: YHFLKA

Arabidopsis Description

At1g32160/F3C3_6 [Source:UniProtKB/TrEMBL;Acc:Q9FVR1]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.