Factsheet for HORVU1Hr1G086110.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G390400.1	Wheat	mitochondrion	84.93	90.79
TraesCS1B01G418600.1	Wheat	mitochondrion	84.69	90.54
TraesCS1D01G398600.1	Wheat	mitochondrion	84.69	90.54
Os11t0456100-01	Rice	mitochondrion	67.7	73.32
Zm00001d049232_P002	Maize	mitochondrion	64.11	68.72
VIT_00s2037g00010.t01	Wine grape	cytosol	12.2	47.66
VIT_00s0360g00020.t01	Wine grape	mitochondrion	25.84	44.08
PGSC0003DMT400022517	Potato	mitochondrion	25.6	42.97
CDX86293	Canola	plastid	33.25	40.88
Bra037475.1-P	Field mustard	plastid	33.25	40.88
AT3G07310.1	Thale cress	plastid	35.65	40.49
Bra029638.1-P	Field mustard	plastid	35.17	39.95
CDY34905	Canola	plastid	32.54	39.77
CDY28064	Canola	plastid	34.69	39.3
CDX85350	Canola	plastid	31.82	39.12
Bra040372.1-P	Field mustard	plastid	32.78	39.03
CDY24630	Canola	plastid	34.69	38.67
CDY60823	Canola	plastid	32.54	38.64
KRG99623	Soybean	plastid	34.21	38.44
KRH46625	Soybean	plastid	34.69	38.26
AT5G48590.1	Thale cress	plastid	31.34	38.08
PGSC0003DMT400053202	Potato	cytosol	26.32	38.06
PGSC0003DMT400022519	Potato	plastid	35.41	37.95
PGSC0003DMT400084936	Potato	cytosol	27.03	37.79
KRH07429	Soybean	plastid	34.93	37.63
Solyc09g057580.2.1	Tomato	plastid	18.9	37.09
Solyc06g007550.1.1	Tomato	cytosol	24.4	36.3
KRH66142	Soybean	plastid	33.49	35.62
Solyc06g007560.1.1	Tomato	plastid	27.75	32.04
HORVU4Hr1G008300.1	Barley	plastid	26.32	26.96
HORVU2Hr1G102880.1	Barley	cytosol, nucleus, plastid	25.12	21.26

Protein Annotations

EnsemblPlants:HORVU1Hr1G086110.1	EnsemblPlantsGene:HORVU1Hr1G086110	InterPro:At3g17800-like	InterPro:DUF760	PANTHER:PTHR31808	PANTHER:PTHR31808:SF2
PFAM:PF05542	SEG:seg	UniParc:UPI000B461D89	UniProt:A0A287GKZ5	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:536884526..536887710

Molecular Weight (calculated)

47227.1 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.351

Length

418 amino acids

Sequence
(BLAST)

001: ECTLLDTAHG VILKRIRSPS PPAPVLSMAA LRPAPRAAIG DRGPAAVCRG SRRPSYLSSP SPCWQQGDML NRRSKCTSRK LLTTVTGAKG DESEFDSVNA
101: PLEPQTWEGS FLCGLLKNQP QIFLVAAARQ LQQLSIQRKD TLTRWEHSIG SPEDCLHRRI AEMKEQECRT AIEDVMYMLI VHKYSKIEVP MVPNLSKIIN
201: NRRLHIWPPR EADLESIHGS EVLCQIREHL TSIIRWVHRN GPKINRSTLR VKRLQLARIY SASIMYGYFL KSVTLRHRLD LTLARSQECS QPIQLLNAQL
301: ATTRKKEHQE AFGGSVETVS SSKPSSVVDP HDLKSYMMGF DPKTLELCAK LRTNEACNLI EKHSWALFGE KMGSTEIDEA VILDPASLKR LLLEAIAFGS
401: FLWDTEDYVD EIYKLQDS

Best Arabidopsis Sequence Match ( AT3G07310.1 )
(BLAST)

001: MDSCLSNQTA LQFLPSRSRR QSGDGGGGFV IPAKRKIQYS SMVVVAAAGQ SRCEPGSSLN APLEPRSAQG RFLRSVLLNK RQLFHYAAAD ELKQLADDRE
101: AALARMSLSS GSDEASLHRR IAELKERYCK TAVQDIMYML IFYKYSEIRV PLVPKLSRCI YNGRLEIWPS KDWELESIYS CDTLEIIKEH VSAVIGLRVN
201: SCVTDNWATT QIQKLHLRKV YAASILYGYF LKSASLRHQL ECSLSDIHGS GYLKSPIFGC SFTTGTAQIS NKQQLRHYIS DFDPETLQRC AKPRTEEARN
301: LIEKQSLALF GTEESDETIV TSFSSLKRLV LEAVAFGTFL WDTELYVDGA YKLKENGNAE EQEGKKSI

Arabidopsis Description

F21O3.2 protein [Source:UniProtKB/TrEMBL;Acc:Q9S7A6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.