Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G528500.1 | Wheat | mitochondrion, plastid | 78.18 | 76.91 |
| KXG27309 | Sorghum | mitochondrion, plastid | 62.94 | 63.29 |
| Zm00001d002000_P003 | Maize | cytosol, mitochondrion, plastid | 62.5 | 63.05 |
| TraesCS6D01G122000.1 | Wheat | cytosol | 15.13 | 44.52 |
| TraesCS4D01G035100.1 | Wheat | cytosol | 40.68 | 42.26 |
| TraesCS5D01G388700.1 | Wheat | cytosol, golgi, unclear | 39.91 | 42.13 |
| TraesCS5D01G513100.1 | Wheat | cytosol | 39.14 | 41.13 |
| TraesCS4D01G035200.1 | Wheat | cytosol | 36.62 | 40.29 |
| TraesCS5D01G388800.1 | Wheat | cytosol | 38.93 | 39.58 |
| TraesCS1D01G215800.2 | Wheat | cytosol | 36.07 | 38.89 |
| TraesCS7D01G029400.1 | Wheat | cytosol | 10.75 | 36.98 |
| TraesCS2D01G313400.1 | Wheat | plastid | 34.65 | 34.73 |
| TraesCS6D01G154600.1 | Wheat | plastid | 34.21 | 34.63 |
| TraesCS4D01G294100.1 | Wheat | plastid | 34.65 | 34.27 |
| TraesCS6D01G121900.1 | Wheat | mitochondrion | 16.67 | 34.0 |
| TraesCS4D01G347300.1 | Wheat | cytosol | 32.79 | 33.79 |
| TraesCS5D01G013400.1 | Wheat | plastid | 33.77 | 33.19 |
| TraesCS7D01G244800.1 | Wheat | plastid | 33.66 | 32.94 |
| TraesCS5D01G041100.1 | Wheat | plastid | 32.68 | 31.53 |
| TraesCS6D01G010100.1 | Wheat | plastid | 31.69 | 30.78 |
| KRH30640 | Soybean | cytosol | 6.14 | 29.95 |
Protein Annotations
| Gene3D:1.20.245.10 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.375.10 | MapMan:50.1.12 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 | InterPro:LipOase |
| InterPro:LipOase_C | InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_plant | PFAM:PF00305 | InterPro:PLAT/LH2_dom |
| InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 | PFscan:PS51393 | PANTHER:PTHR11771 |
| PANTHER:PTHR11771:SF91 | SMART:SM00308 | SUPFAM:SSF48484 | SUPFAM:SSF49723 | EnsemblPlantsGene:TraesCS2D01G528400 | EnsemblPlants:TraesCS2D01G528400.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:616058539..616073810
Molecular Weight (calculated)
100092.0 Da
IEP (calculated)
6.587
GRAVY (calculated)
-0.318
Length
912 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIRHSPRSH APSLAGAGAP GWTTTLLRPA RGPGRRVGPR SLLVPWAPRS ELKFLHPSAC ISHGATTTTP KQARAVAGSD VRASSATTSA RVQGKLLLQS
101: SVDSPDGRLR LSVQLVSATV AGSDGRGMRG EAAALDAVIA SGETELDVEL PWDDEALGAP GAVLVTNHSD LPVYLKLLSL TSPAVHFVCD GWVYPVGKHP
201: YRLFFTNDAY VKENTPAALL KDREDELRQL RGEGVPADEP LQKWDRVYDY ALYNDLGNPD LRKDLARPVL GGSEEYPYPR RTRTSRPPTK TDPESEARVP
301: VEQEVYIPCD ERVGPAVSAP SLPKLGGHFK SLADIYSLFG LGRPTLLYVA IQIVATLFRI LDSNRYTIKE LIDGTVKPVL SLPQVISANP KKWRTDEEFA
401: REMLAGTSPV AIKRVTEFPL TSKLERAVYG DQNSRITKEH VEKNMGGSMA VPQAIQEGKL YFVDHHDWVM PYLKRINELP GAEEMGEISQ RKVYAARTLL
501: LLQDDSTLKP LAIELSSPDP EDERHGAIST VYTPPVDRAG DDTFTAWELA KAHAAANDAC KNNFVHHWLN AHATMEPVVI AANRQLSVLH PIHKLLKPHF
601: RKTLEINATA RQIIFGAGDR RKGGGIYRGI HEVAFFPSKY GMEMSSKAYR TWNFTDLALP NELIKRGVAR GDPKKPEELE LLIKDYPYAV DGLEIWTAIK
701: EWVTDYCVIY YGDGDGAVAG DSELRAWWSE VRNVGHGDLS DAPWWPAMDC VDDLVETCAT IIWLGSAYHS AVSFGQYAYN GFVPNRPTIT SGEVPSDAGA
801: VVTEAEFLGH ITPRNEAFGL MALTMSPPVK PGEPLMGERP DTERWTSEQR AAKALLEFNA KLDAVAEAIK KRNADGALRN RNGPVEVPYT LLAPRADPAA
901: PHVGGIPNSI AV
101: SVDSPDGRLR LSVQLVSATV AGSDGRGMRG EAAALDAVIA SGETELDVEL PWDDEALGAP GAVLVTNHSD LPVYLKLLSL TSPAVHFVCD GWVYPVGKHP
201: YRLFFTNDAY VKENTPAALL KDREDELRQL RGEGVPADEP LQKWDRVYDY ALYNDLGNPD LRKDLARPVL GGSEEYPYPR RTRTSRPPTK TDPESEARVP
301: VEQEVYIPCD ERVGPAVSAP SLPKLGGHFK SLADIYSLFG LGRPTLLYVA IQIVATLFRI LDSNRYTIKE LIDGTVKPVL SLPQVISANP KKWRTDEEFA
401: REMLAGTSPV AIKRVTEFPL TSKLERAVYG DQNSRITKEH VEKNMGGSMA VPQAIQEGKL YFVDHHDWVM PYLKRINELP GAEEMGEISQ RKVYAARTLL
501: LLQDDSTLKP LAIELSSPDP EDERHGAIST VYTPPVDRAG DDTFTAWELA KAHAAANDAC KNNFVHHWLN AHATMEPVVI AANRQLSVLH PIHKLLKPHF
601: RKTLEINATA RQIIFGAGDR RKGGGIYRGI HEVAFFPSKY GMEMSSKAYR TWNFTDLALP NELIKRGVAR GDPKKPEELE LLIKDYPYAV DGLEIWTAIK
701: EWVTDYCVIY YGDGDGAVAG DSELRAWWSE VRNVGHGDLS DAPWWPAMDC VDDLVETCAT IIWLGSAYHS AVSFGQYAYN GFVPNRPTIT SGEVPSDAGA
801: VVTEAEFLGH ITPRNEAFGL MALTMSPPVK PGEPLMGERP DTERWTSEQR AAKALLEFNA KLDAVAEAIK KRNADGALRN RNGPVEVPYT LLAPRADPAA
901: PHVGGIPNSI AV
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.