Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16725 | Soybean | cytosol | 41.94 | 56.28 |
| KRH62399 | Soybean | cytosol, endoplasmic reticulum | 41.94 | 55.08 |
| KRH62403 | Soybean | cytosol, endoplasmic reticulum | 38.71 | 52.86 |
| KRH57987 | Soybean | cytosol | 41.29 | 49.61 |
| TraesCS7D01G029400.1 | Wheat | cytosol | 38.06 | 44.53 |
| KRH35534 | Soybean | cytosol | 62.26 | 43.08 |
| KRH13357 | Soybean | endoplasmic reticulum | 31.94 | 40.91 |
| PGSC0003DMT400063654 | Potato | cytosol | 57.42 | 36.25 |
| CDY70916 | Canola | cytosol | 57.74 | 35.52 |
| TraesCS6A01G132500.1 | Wheat | mitochondrion | 99.35 | 35.28 |
| TraesCS6A01G132200.1 | Wheat | mitochondrion | 99.35 | 35.28 |
| TraesCS6B01G160400.1 | Wheat | mitochondrion | 99.35 | 35.28 |
| Solyc01g099170.2.1 | Tomato | cytosol, mitochondrion | 45.48 | 27.59 |
| TraesCS4D01G035200.1 | Wheat | cytosol | 70.0 | 26.18 |
| TraesCS5D01G513100.1 | Wheat | cytosol | 67.74 | 24.19 |
| TraesCS4D01G035100.1 | Wheat | cytosol | 68.06 | 24.03 |
| TraesCS5D01G388700.1 | Wheat | cytosol, golgi, unclear | 66.77 | 23.96 |
| VIT_14s0128g00780.t01 | Wine grape | cytosol | 63.87 | 23.05 |
| VIT_14s0128g00790.t01 | Wine grape | cytosol | 64.52 | 23.02 |
| GSMUA_Achr1P22970_001 | Banana | cytosol | 62.58 | 22.93 |
| Solyc08g029000.2.1 | Tomato | cytosol, extracellular, nucleus | 62.9 | 22.65 |
| TraesCS5D01G388800.1 | Wheat | cytosol | 65.48 | 22.63 |
| KRG91271 | Soybean | cytosol | 62.26 | 22.49 |
| VIT_05s0020g03170.t01 | Wine grape | cytosol | 63.55 | 22.49 |
| PGSC0003DMT400028158 | Potato | cytosol | 62.26 | 22.39 |
| PGSC0003DMT400081370 | Potato | cytosol | 63.23 | 22.35 |
| PGSC0003DMT400063469 | Potato | cytosol | 60.65 | 22.3 |
| Solyc09g075870.1.1 | Tomato | cytosol | 61.29 | 22.25 |
| Solyc09g075860.2.1 | Tomato | cytosol, nucleus | 62.9 | 22.23 |
| Solyc08g014000.2.1 | Tomato | cytosol, nucleus, plastid | 61.61 | 22.21 |
| Os11t0575600-01 | Rice | mitochondrion | 61.61 | 22.0 |
| Solyc01g099200.2.1 | Tomato | cytosol, plastid | 59.68 | 22.0 |
| Solyc01g099160.2.1 | Tomato | cytosol, extracellular, nucleus | 60.97 | 21.93 |
| PGSC0003DMT400054145 | Potato | cytosol | 60.65 | 21.91 |
| KRH44092 | Soybean | nucleus | 59.03 | 21.35 |
| KRH44090 | Soybean | endoplasmic reticulum | 58.71 | 21.16 |
| PGSC0003DMT400063446 | Potato | cytosol | 54.52 | 21.02 |
| Bra021322.1-P | Field mustard | cytosol | 58.06 | 21.0 |
| AT1G55020.1 | Thale cress | cytosol | 58.06 | 20.95 |
| KRH33939 | Soybean | cytosol, endoplasmic reticulum | 58.39 | 20.92 |
| AT3G22400.1 | Thale cress | cytosol | 59.68 | 20.88 |
| KRH44094 | Soybean | endoplasmic reticulum | 58.39 | 20.88 |
| CDY46325 | Canola | cytosol | 59.35 | 20.86 |
| Solyc01g099210.2.1 | Tomato | cytosol | 58.06 | 20.86 |
| PGSC0003DMT400063477 | Potato | cytosol | 57.42 | 20.79 |
| KRH47066 | Soybean | endoplasmic reticulum, nucleus | 57.1 | 20.61 |
| KRH23266 | Soybean | cytosol | 54.84 | 20.58 |
| KRH68548 | Soybean | cytosol | 56.77 | 20.51 |
| Solyc01g099180.2.1 | Tomato | cytosol | 56.45 | 20.49 |
| KRH23265 | Soybean | endoplasmic reticulum, nucleus | 57.1 | 20.44 |
| Bra039948.1-P | Field mustard | cytosol | 58.39 | 20.41 |
| Solyc01g099190.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 56.45 | 20.4 |
| KRH47522 | Soybean | endoplasmic reticulum, nucleus | 56.77 | 20.35 |
| KRH44093 | Soybean | endoplasmic reticulum | 55.48 | 20.33 |
| KRH10050 | Soybean | endoplasmic reticulum | 56.13 | 20.3 |
| Bra023829.1-P | Field mustard | cytosol | 59.03 | 20.27 |
| CDY38326 | Canola | cytosol | 57.74 | 20.18 |
| CDY64191 | Canola | cytosol | 59.03 | 20.18 |
| KRH47525 | Soybean | endoplasmic reticulum | 56.13 | 20.05 |
| KRH10053 | Soybean | endoplasmic reticulum | 54.19 | 19.7 |
| KRH23268 | Soybean | endoplasmic reticulum | 54.19 | 19.7 |
| KRH47067 | Soybean | endoplasmic reticulum | 53.87 | 19.33 |
| KRH44095 | Soybean | endoplasmic reticulum | 53.87 | 19.28 |
| KRH44097 | Soybean | cytosol, endoplasmic reticulum | 53.55 | 19.12 |
| KRH10051 | Soybean | endoplasmic reticulum, nucleus | 52.58 | 19.04 |
| PGSC0003DMT400063452 | Potato | cytosol | 48.71 | 18.9 |
| TraesCS1D01G215800.2 | Wheat | cytosol | 50.0 | 18.32 |
| KRH23269 | Soybean | endoplasmic reticulum | 44.19 | 16.67 |
| TraesCS4D01G347300.1 | Wheat | cytosol | 44.84 | 15.71 |
| TraesCS7D01G244800.1 | Wheat | plastid | 45.81 | 15.24 |
| TraesCS6D01G154600.1 | Wheat | plastid | 44.19 | 15.21 |
| KRH47069 | Soybean | endoplasmic reticulum | 22.26 | 15.16 |
| TraesCS5D01G041100.1 | Wheat | plastid | 46.13 | 15.13 |
| TraesCS2D01G528400.1 | Wheat | cytosol, mitochondrion | 44.52 | 15.13 |
| TraesCS6D01G010100.1 | Wheat | plastid | 45.16 | 14.91 |
| TraesCS4D01G294100.1 | Wheat | plastid | 44.19 | 14.86 |
| CDY43490 | Canola | cytosol, plasma membrane | 57.42 | 14.8 |
| TraesCS5D01G013400.1 | Wheat | plastid | 44.19 | 14.76 |
| Solyc01g099150.2.1 | Tomato | nucleus | 40.65 | 14.62 |
| TraesCS2D01G528500.1 | Wheat | mitochondrion, plastid | 43.23 | 14.46 |
| TraesCS2D01G313400.1 | Wheat | plastid | 42.26 | 14.4 |
| PGSC0003DMT400063461 | Potato | cytosol | 23.87 | 10.66 |
| KRG88464 | Soybean | cytosol | 1.94 | 1.32 |
| VIT_06s0004g01580.t01 | Wine grape | cytosol | 1.29 | 1.19 |
| KRH47064 | Soybean | endoplasmic reticulum | 0.97 | 0.53 |
| TraesCS6D01G121900.1 | Wheat | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G122000.1 | EnsemblPlantsGene:TraesCS6D01G122000 | Gene3D:1.20.245.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR013819 |
| InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_C_sf | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF49 | PFAM:PF00305 |
| PFscan:PS51393 | SUPFAM:SSF48484 | MapMan:50.1.12 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:86660126..86661058
Molecular Weight (calculated)
35043.6 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.333
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MTINALARQV LISAGGFFEM TVCPGEHALR ISSEVYRNWN FTEQALPVDL IKRGVAKEDT ESPCGVSLHI KDYPYAVDGL AVWSAIETWV DEYCRIYYPC
101: DDVLRSDVEL QAWWKEVREV GHGDIKDQPW WPKMTTVNEL VRSCATIIWI ASALHAAVNF GQYSYAGYLP NRPTVSRRQM PEPGTKEYKE VETDPDLAFI
201: HTITSQLQSI IGVSVIEVLS NHSSDEVYLG QRDEPKWTSD VKAKKAFEDF SQKLIDIEKR IMNMNANRQL KNRNGPAKFP YMLLYPNTSD IDGESATGIT
301: AKGIPNSISI
101: DDVLRSDVEL QAWWKEVREV GHGDIKDQPW WPKMTTVNEL VRSCATIIWI ASALHAAVNF GQYSYAGYLP NRPTVSRRQM PEPGTKEYKE VETDPDLAFI
201: HTITSQLQSI IGVSVIEVLS NHSSDEVYLG QRDEPKWTSD VKAKKAFEDF SQKLIDIEKR IMNMNANRQL KNRNGPAKFP YMLLYPNTSD IDGESATGIT
301: AKGIPNSISI
001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI
Arabidopsis Description
LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.