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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, nucleus
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
nucleus: 27291164
mitochondrion: 27780359
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH23266 Soybean cytosol 80.6 84.5
KRH10050 Soybean endoplasmic reticulum 74.71 75.5
KRH44090 Soybean endoplasmic reticulum 74.71 75.23
KRH44093 Soybean endoplasmic reticulum 71.25 72.93
KRH47522 Soybean endoplasmic reticulum, nucleus 72.4 72.49
KRH47067 Soybean endoplasmic reticulum 70.9 71.06
KRH47066 Soybean endoplasmic reticulum, nucleus 70.32 70.9
KRH44094 Soybean endoplasmic reticulum 69.86 69.78
KRH47525 Soybean endoplasmic reticulum 69.75 69.59
KRH44097 Soybean cytosol, endoplasmic reticulum 68.48 68.32
KRH44095 Soybean endoplasmic reticulum 68.13 68.13
KRH10051 Soybean endoplasmic reticulum, nucleus 67.21 67.99
KRH16725 Soybean cytosol 18.13 67.97
KRH47069 Soybean endoplasmic reticulum 35.68 67.91
KRH10053 Soybean endoplasmic reticulum 66.63 67.64
KRH23268 Soybean endoplasmic reticulum 66.4 67.41
KRH62399 Soybean cytosol, endoplasmic reticulum 18.36 67.37
KRH23269 Soybean endoplasmic reticulum 63.28 66.67
KRH47064 Soybean endoplasmic reticulum 43.76 66.49
KRH57987 Soybean cytosol 19.05 63.95
KRH62403 Soybean cytosol, endoplasmic reticulum 16.74 63.88
KRH35534 Soybean cytosol 32.56 62.95
KRH33939 Soybean cytosol, endoplasmic reticulum 61.55 61.62
KRH68548 Soybean cytosol 60.97 61.54
Os03t0700400-00 Rice cytosol, plasma membrane 8.78 60.32
KRH44092 Soybean nucleus 59.58 60.21
TraesCS4A01G275800.1 Wheat cytosol 16.51 59.83
KRH13357 Soybean endoplasmic reticulum 16.4 58.68
GSMUA_Achr1P22970_001 Banana cytosol 57.27 58.63
GSMUA_AchrUn_... Banana cytosol 52.89 58.42
GSMUA_AchrUn_... Banana cytosol 57.39 58.13
GSMUA_Achr6P25110_001 Banana cytosol 53.0 57.81
TraesCS4A01G359800.1 Wheat cytosol 35.33 57.63
KRG91271 Soybean cytosol 56.93 57.46
TraesCS6D01G122000.1 Wheat cytosol 20.44 57.1
GSMUA_Achr6P25090_001 Banana cytosol 55.08 56.92
GSMUA_Achr1P24370_001 Banana cytosol 55.43 56.67
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 56.93 56.21
Zm00001d033623_P003 Maize cytosol 56.0 55.94
Os03t0699700-01 Rice cytosol, plastid 55.43 55.62
EER93612 Sorghum cytosol 55.08 55.08
EER93611 Sorghum cytosol 56.47 55.07
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 54.73 54.86
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 54.5 54.82
TraesCS4D01G035200.1 Wheat cytosol 52.42 54.76
TraesCS5A01G378800.2 Wheat cytosol 49.19 54.76
TraesCS5A01G378700.1 Wheat cytosol 54.5 54.63
TraesCS5B01G382300.1 Wheat cytosol, unclear 54.5 54.63
EES04025 Sorghum cytosol 54.73 54.61
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 55.89 54.57
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 54.39 54.51
Os03t0738600-01 Rice plasma membrane, plastid 54.73 54.48
EES04028 Sorghum cytosol 54.62 54.18
TraesCS5B01G382400.1 Wheat cytosol, golgi 53.46 54.09
TraesCS4B01G037700.3 Wheat cytosol, golgi 53.7 54.01
TraesCS5B01G382600.1 Wheat cytosol 53.58 53.89
HORVU5Hr1G093770.1 Barley cytosol 53.7 53.88
KXG37783 Sorghum cytosol 55.31 53.64
Zm00001d033624_P001 Maize cytosol 54.85 53.55
TraesCS4A01G275900.1 Wheat cytosol, unclear 54.27 53.53
TraesCS4B01G037800.1 Wheat cytosol 54.27 53.53
TraesCS5A01G378900.1 Wheat cytosol 53.35 53.47
TraesCS4D01G035100.1 Wheat cytosol 54.16 53.42
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 53.81 53.08
Zm00001d042541_P002 Maize cytosol 54.16 53.05
Zm00001d042540_P008 Maize cytosol 54.5 52.91
GSMUA_Achr9P19250_001 Banana plasma membrane 58.08 52.89
TraesCS5A01G379000.1 Wheat nucleus, unclear 46.19 51.95
TraesCS5D01G513100.1 Wheat cytosol 51.85 51.73
TraesCS5D01G388800.1 Wheat cytosol 53.58 51.73
TraesCS3B01G602500.1 Wheat cytosol 52.42 51.53
TraesCS3B01G605700.1 Wheat cytosol 52.54 51.41
TraesCS6B01G160400.1 Wheat mitochondrion 51.27 50.86
TraesCS6A01G132200.1 Wheat mitochondrion 51.15 50.74
TraesCS6A01G132500.1 Wheat mitochondrion 51.15 50.74
HORVU5Hr1G117110.1 Barley cytosol 51.73 50.51
KRG88464 Soybean cytosol 26.33 50.0
Os11t0575600-01 Rice mitochondrion 49.54 49.42
GSMUA_Achr6P25080_001 Banana cytosol 44.11 49.29
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 27.71 49.18
TraesCS6B01G395700.1 Wheat cytosol 43.65 46.55
TraesCS6D01G121900.1 Wheat mitochondrion 22.4 43.4
KRH10882 Soybean cytosol 21.25 42.4
KRH69027 Soybean plastid 43.42 41.73
KRG97300 Soybean plastid 42.96 41.38
KRH47615 Soybean nucleus 44.11 41.21
KRH06197 Soybean nucleus 43.76 41.11
KRG89889 Soybean cytosol, plastid 40.3 40.58
KRG89883 Soybean cytosol, plastid 40.18 40.51
KRH29669 Soybean plastid 41.92 40.29
KRH07345 Soybean cytosol, plastid 39.95 40.19
KRH42646 Soybean plastid 42.73 40.17
KRH66214 Soybean cytosol 39.95 39.95
KRH29668 Soybean nucleus 41.45 39.62
KRG89888 Soybean nucleus 40.99 39.31
KRH17965 Soybean plastid 41.45 39.11
KRH18682 Soybean cytosol, mitochondrion 40.99 38.97
KRH24671 Soybean cytosol, plastid 41.11 38.95
KRH21441 Soybean cytosol 39.95 38.02
KRH50048 Soybean cytosol 39.15 37.25
KRH30640 Soybean cytosol 6.58 30.48
GSMUA_Achr6P25100_001 Banana cytosol 42.26 3.05
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
EntrezGene:547774EMBL:ACUP02008458ncoils:CoilEnsemblPlantsGene:GLYMA_13G347500GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006629GO:GO:0006631GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114UniProt:I1M596InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EMBL:JQ929619
EnsemblPlants:KRH23265ProteinID:KRH23265ProteinID:KRH23265.1InterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sf
InterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095
PFscan:PS51393SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniParc:UPI00023CEDE6SEG:seg
Description
hypothetical protein
Coordinates
chr13:+:43761727..43766023
Molecular Weight (calculated)
97280.1 Da
IEP (calculated)
6.656
GRAVY (calculated)
-0.296
Length
866 amino acids
Sequence
(BLAST)
001: MFSVPGVSGI LNRGGGHKIK GTVVLMRKNV LDFNSVADLT KGNVGGLIGT GLNVVGSTLD NLTAFLGRSV ALQLISATKP LANGKGKVGK DTFLEGIIVS
101: LPTLGAGESA FNIQFEWDES MGIPGAFYIK NYMQVEFYLK SLTLEDVPNQ GTIRFVCNSW VYNTKLYKSV RIFFANHTYV PSETPAALVG YREEELKNLR
201: GDGKGERKEH DRIYDYDVYN DLGNPDHGEN FARPILGGSS THPYPRRGRT GRYPTRKDQN SEKPGEVYVP RDENFGHLKS SDFLAYGIKS LSQYVLPAFE
301: SVFDLNFTPN EFDSFQDVRD LHEGGIKLPT EVISTIMPLP VVKELFRTDG EQVLKFPPPH VIQVSKSAWM TDEEFAREMV AGVNPCVIRG LQEFPPKSNL
401: DPTIYGEQTS KITADALDLD GYTVDEALAS RRLFMLDYHD VFMPYIRRIN QTYAKAYATR TILFLRENGT LKPVAIELSL PHPAGDLSGA VSQVILPAKE
501: GVESTIWLLA KAYVVVNDSC YHQLMSHWLN THAVIEPFII ATNRHLSALH PIYKLLTPHY RDTMNINALA RQSLINADGI IEKSFLPSKH SVEMSSAVYK
601: NWVFTDQALP ADLIKRGVAI KDPSAPHGLR LLIEDYPYAV DGLEIWAAIK TWVQEYVSLY YARDDDVKPD SELQQWWKEA VEKGHGDLKD KPWWPKLQTI
701: EELVEICTII IWTASALHAA VNFGQYPYGG FILNRPTSSR RLLPEKGTPE YEEMVKSHQK AYLRTITSKF QTLVDLSVIE ILSRHASDEV YLGQRDNPHW
801: TSDSKALQAF QKFGNKLKEI EEKLARKNND QSLSNRLGPV QLPYTLLHPN SEEGLTCRGI PNSISI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.