Factsheet for HORVU5Hr1G093770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G382600.1	Wheat	cytosol	94.55	94.77
TraesCS5A01G378900.1	Wheat	cytosol	93.97	93.87
TraesCS5D01G388800.1	Wheat	cytosol	94.9	91.3
TraesCS5A01G379000.1	Wheat	nucleus, unclear	80.53	90.26
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	81.69	81.6
Os03t0738600-01	Rice	plasma membrane, plastid	77.06	76.44
EES04025	Sorghum	cytosol	73.58	73.16
Zm00001d042541_P002	Maize	cytosol	74.04	72.29
EES04028	Sorghum	cytosol	72.42	71.59
Zm00001d042540_P008	Maize	cytosol	71.61	69.28
HORVU5Hr1G117110.1	Barley	cytosol	71.15	69.22
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	36.5	64.55
KRH35534	Soybean	cytosol	32.68	62.95
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	63.27	62.19
KRH16725	Soybean	cytosol	16.22	60.61
CDY70916	Canola	cytosol	35.34	60.52
GSMUA_Achr1P22970_001	Banana	cytosol	59.1	60.28
PGSC0003DMT400063654	Potato	cytosol	34.18	60.08
VIT_14s0128g00780.t01	Wine grape	cytosol	58.98	59.25
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.11	58.9
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	58.17	58.24
KRH57987	Soybean	cytosol	17.38	58.14
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	57.94	58.07
PGSC0003DMT400054145	Potato	cytosol	57.59	57.93
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	57.59	57.79
PGSC0003DMT400028158	Potato	cytosol	57.71	57.77
VIT_14s0128g00790.t01	Wine grape	cytosol	58.17	57.77
PGSC0003DMT400063446	Potato	cytosol	53.53	57.46
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.06	57.27
Bra021322.1-P	Field mustard	cytosol	56.32	56.71
Solyc01g099180.2.1	Tomato	cytosol	55.5	56.09
KRH68548	Soybean	cytosol	55.74	56.06
KRG91271	Soybean	cytosol	55.39	55.71
AT1G55020.1	Thale cress	cytosol	55.39	55.65
Solyc09g075860.2.1	Tomato	cytosol, nucleus	56.32	55.42
PGSC0003DMT400081370	Potato	cytosol	56.32	55.42
PGSC0003DMT400063477	Potato	cytosol	54.81	55.26
PGSC0003DMT400063461	Potato	cytosol	44.38	55.19
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	54.81	55.13
KRH33939	Soybean	cytosol, endoplasmic reticulum	55.04	54.91
KRH10050	Soybean	endoplasmic reticulum	54.46	54.84
Solyc01g099210.2.1	Tomato	cytosol	54.81	54.81
Solyc01g099200.2.1	Tomato	cytosol, plastid	53.3	54.7
VIT_05s0020g03170.t01	Wine grape	cytosol	55.27	54.45
PGSC0003DMT400063469	Potato	cytosol	53.07	54.33
KRH44095	Soybean	endoplasmic reticulum	54.23	54.04
KRH23266	Soybean	cytosol	51.56	53.87
KRH23265	Soybean	endoplasmic reticulum, nucleus	53.88	53.7
PGSC0003DMT400063452	Potato	cytosol	49.71	53.69
KRH10051	Soybean	endoplasmic reticulum, nucleus	53.19	53.62
KRH10053	Soybean	endoplasmic reticulum	52.84	53.46
Solyc09g075870.1.1	Tomato	cytosol	52.84	53.4
KRH44097	Soybean	cytosol, endoplasmic reticulum	53.65	53.34
KRH44093	Soybean	endoplasmic reticulum	52.26	53.31
KRH23268	Soybean	endoplasmic reticulum	52.38	52.99
KRH47066	Soybean	endoplasmic reticulum, nucleus	52.61	52.85
CDY46325	Canola	cytosol	53.88	52.72
KRH44090	Soybean	endoplasmic reticulum	52.38	52.56
KRH47067	Soybean	endoplasmic reticulum	52.61	52.55
Bra039948.1-P	Field mustard	cytosol	54.0	52.54
AT3G22400.1	Thale cress	cytosol	53.65	52.26
KRH44094	Soybean	endoplasmic reticulum	52.49	52.25
CDY38326	Canola	cytosol	53.65	52.2
KRH13357	Soybean	endoplasmic reticulum	14.6	52.07
KRH23269	Soybean	endoplasmic reticulum	49.48	51.95
KRH47522	Soybean	endoplasmic reticulum, nucleus	51.91	51.79
Bra023829.1-P	Field mustard	cytosol	54.0	51.61
CDY64191	Canola	cytosol	53.88	51.27
VIT_06s0004g01580.t01	Wine grape	cytosol	19.7	50.75
KRH47525	Soybean	endoplasmic reticulum	50.98	50.69
KRH47069	Soybean	endoplasmic reticulum	26.19	49.67
HORVU3Hr1G047210.1	Barley	cytosol	12.28	48.85
KRH44092	Soybean	nucleus	47.86	48.19
KRH47064	Soybean	endoplasmic reticulum	31.29	47.37
KRG88464	Soybean	cytosol	24.57	46.49
HORVU1Hr1G054390.4	Barley	cytosol	44.5	45.5
HORVU5Hr1G055110.2	Barley	mitochondrion	18.19	44.48
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	25.38	42.86
Solyc01g099150.2.1	Tomato	nucleus	41.02	41.07
CDY43490	Canola	cytosol, plasma membrane	56.32	40.4
HORVU7Hr1G050680.1	Barley	peroxisome	31.98	40.35
HORVU2Hr1G115980.2	Barley	plastid	40.9	40.02
HORVU4Hr1G076570.6	Barley	cytosol, plastid	40.9	38.54
HORVU6Hr1G033600.1	Barley	plastid	39.75	38.28
HORVU2Hr1G115960.1	Barley	plastid	40.32	37.62
HORVU5Hr1G001180.1	Barley	plastid	39.51	36.63
HORVU6Hr1G000510.1	Barley	plastid	39.05	36.16
HORVU7Hr1G006320.4	Barley	plastid	37.43	34.84

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EMBL:AK360423	ncoils:Coil	UniProt:F2D961	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G093770	EnsemblPlants:HORVU5Hr1G093770.1	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433
InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF54	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI0002005AE8	SEG:seg

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F2D961]

Coordinates

chrchr5H:-:592770259..592773973

Molecular Weight (calculated)

96526.5 Da

IEP (calculated)

6.804

GRAVY (calculated)

-0.277

Length

863 amino acids

Sequence
(BLAST)

001: MFGGGLDLIG GLTGGGSKTR LKGSVVLTRK NALDFNDLGA TVIDGITEFL GRGVTCQLIS STNVDSNNGG RGKVGAEAGL EQWITTLPFI TVGENKFGVT
101: FDWAVDKLGV PGAIIVKNNH ASEFFLKTIT LDNVPGHGKV VFVANSWVYP QSKYRYNRVF FANDTYLPSK MPPALKPYRD DELRNLRGDD QQGPYAAHDR
201: VYRYDVYHDL GESRQILGGS KEFPYPRRCR TGRKLSQTNP DRESRLLPLV QSIYVPRDEL FGHLKQSDFL GYSLKALVDG IIPAIRTYVD LSPGEFDSFA
301: DILKLYEGGI KLPDIPALQE MRKRFPLQLV KDLIPKGGDF LLKPPKPQVI KQDEKAWMTD AEFAREILAG VNPMMITRVT EFPPKSSLDP SQYGDHTSTI
401: TEAQIGKSLE GLTAQQAVAS NRLYILDHHD HMMPYLVRLN NLDDTFLYAT RTLLFLKGDG TLAPVAIELS TPLVQGGLTT AKSTVYTPAS TGVEAWIWQL
501: AKAYVCVNDY GYHQLVSHWL NTHAVMEPFI IATNRQLSVM HPVHKLLHPH YRDTMNINSR ARELLVNAGG IIELTVFQRK YAMEMSSVTY KDWNLNEQAL
601: PDDLIKRGMA VRDPSSPHKV RLLLEDYPYA VDGLAIWHAI EDWVTEYVAI YYTSDSVLQG DVELQAWWKE VREVGHGDLK DAAWWPEMKT VAELVKVCTT
701: IIWTGSALHA AVNFGQYPYA GYHPNKPSAS RRPMPEPGTE EYALLARDPE KVFIRTITNQ LQAIIGISLL EILSKHSSDE IYLGQRDTPE WTSDAKALEA
801: FKRFGTRLEG IESEVVALNG NPQLKNRNGP VHFPYMLLYP NTSDHTGKAE GLTARGIPNS ISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.