Factsheet for HORVU5Hr1G055110.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17420.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0265g00170.t01	Wine grape	cytosol	62.04	43.37
KRH10882	Soybean	cytosol	47.31	38.48
HORVU4Hr1G076570.6	Barley	cytosol, plastid	98.58	37.99
TraesCS4D01G294100.1	Wheat	plastid	96.32	36.88
TraesCS4A01G009400.1	Wheat	plastid	96.32	36.84
TraesCS4B01G295200.1	Wheat	plastid	96.03	36.73
Os03t0179900-01	Rice	plastid	88.95	34.2
EER95400	Sorghum	mitochondrion	87.82	33.55
Zm00001d027893_P001	Maize	plastid	86.4	31.51
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	42.21	30.53
GSMUA_Achr10P...	Banana	cytosol	68.27	27.39
CDY21750	Canola	cytosol, mitochondrion, plastid	69.41	26.66
Solyc03g122340.2.1	Tomato	cytosol	68.56	26.65
PGSC0003DMT400058933	Potato	plastid	68.84	26.59
Bra030988.1-P	Field mustard	cytosol, mitochondrion, plastid	68.84	26.44
Bra016602.1-P	Field mustard	cytosol	68.84	26.44
VIT_09s0002g01080.t01	Wine grape	cytosol	69.41	26.43
CDY64617	Canola	cytosol	68.56	26.33
CDX96769	Canola	cytosol	68.56	26.33
CDX81825	Canola	cytosol	68.27	26.22
AT1G17420.1	Thale cress	cytosol, plastid	67.99	26.12
KRH69027	Soybean	plastid	66.29	25.97
KRG97300	Soybean	plastid	65.44	25.7
KRH47615	Soybean	nucleus	67.42	25.67
KRH06197	Soybean	nucleus	66.86	25.6
AT1G72520.1	Thale cress	plastid	67.14	25.59
Bra008037.1-P	Field mustard	plastid	66.57	25.57
CDY49853	Canola	plastid	66.57	25.57
KRH21441	Soybean	cytosol	60.91	23.63
CDX82146	Canola	plastid	54.96	22.82
KRH50048	Soybean	cytosol	56.94	22.09
HORVU7Hr1G050680.1	Barley	peroxisome	39.38	20.32
HORVU3Hr1G047210.1	Barley	cytosol	12.46	20.28
HORVU6Hr1G033600.1	Barley	plastid	48.16	18.97
HORVU1Hr1G054390.4	Barley	cytosol	44.76	18.72
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	45.61	18.63
HORVU6Hr1G000510.1	Barley	plastid	48.44	18.35
HORVU5Hr1G093770.1	Barley	cytosol	44.48	18.19
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	45.04	18.11
HORVU5Hr1G001180.1	Barley	plastid	47.59	18.05
HORVU5Hr1G117110.1	Barley	cytosol	45.04	17.93
HORVU7Hr1G006320.4	Barley	plastid	45.33	17.26
HORVU2Hr1G115980.2	Barley	plastid	39.94	15.99
HORVU2Hr1G115960.1	Barley	plastid	38.53	14.7

Protein Annotations

Gene3D:1.20.245.10	MapMan:50.1.12	UniProt:A0A287RA20	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016702	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G055110	EnsemblPlants:HORVU5Hr1G055110.2	InterPro:IPR013819	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	PFAM:PF00305	PRINTS:PR00087	ScanProsite:PS00081	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF67	SUPFAM:SSF48484	UniParc:UPI000B46E44D	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:+:432173889..432175286

Molecular Weight (calculated)

39273.5 Da

IEP (calculated)

4.988

GRAVY (calculated)

-0.214

Length

353 amino acids

Sequence
(BLAST)

001: MYTLTNSFRL RTHAIMEPFI LAAHRRMSAM HPIFKLLHPH MRYTLEINAL ARQSLINAEG VIESCFTPGP VSGEISSAYY SNHWRFDLEG LPADLLRRGV
101: AVEDSTQPHG IRLLIEDYPY ANDGLLLWSA IGNWVESYVK LYYPDAGTVQ SDDELQEWYH ESIHVGHADL AGAPWWPPLS TPRDLAAILT TLVWLASAQH
201: AALNFGQYPL GGYVPNRPPL MRRLLPDPER DAAEYAMFLA DPHRFFLNAM PGVLEATKFM AVVDTLSTHS PDEEYLGESL DEGAAPWTGD EEALEAHGMF
301: AADVRRAEET IEGRNADHGR RNRCGAGVLP YELLAPSSPP GVTCRGVPNS ISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.