Factsheet for HORVU7Hr1G050680.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G039260.2
HORVU2Hr1G094490.1
HORVU4Hr1G061500.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G45140.1	HORVU2Hr1G094490.1	AT5G18110.1	11117257
AT3G45140.1	HORVU4Hr1G061500.4	AT5G18110.1	11117257
AT3G45140.1	HORVU1Hr1G039260.2	AT5G35620.1	11117257

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G246200.1	Wheat	plastid	87.72	64.45
TraesCS7B01G145200.1	Wheat	plastid	87.43	64.44
TraesCS7D01G244800.1	Wheat	plastid	87.57	64.27
VIT_13s0064g01490.t01	Wine grape	cytosol	34.5	59.15
OQU80925	Sorghum	cytosol	74.71	59.08
HORVU3Hr1G047210.1	Barley	cytosol	18.71	58.99
Os08t0509100-01	Rice	nucleus	76.02	55.26
Os08t0508800-01	Rice	nucleus, plasma membrane	73.83	54.65
Zm00001d031449_P001	Maize	mitochondrion	74.56	53.35
CDY61034	Canola	cytosol	32.89	50.34
PGSC0003DMT400020118	Potato	cytosol	50.73	50.07
VIT_06s0004g01460.t01	Wine grape	plastid	43.71	50.0
Solyc01g009680.2.1	Tomato	plastid	32.16	49.66
VIT_06s0004g01500.t01	Wine grape	cytosol	56.58	48.93
VIT_13s0064g01500.t01	Wine grape	cytosol	17.4	47.6
VIT_06s0004g01480.t01	Wine grape	cytosol	55.12	47.54
GSMUA_Achr9P12470_001	Banana	plastid	58.48	47.45
CDY07409	Canola	cytosol	26.46	46.77
CDY72550	Canola	cytosol	21.34	45.48
VIT_13s0064g01480.t01	Wine grape	plastid	57.16	43.3
KRG89883	Soybean	cytosol, plastid	52.49	41.79
CDY16339	Canola	plastid	46.2	41.52
VIT_06s0004g01470.t01	Wine grape	cytosol	54.53	41.31
VIT_06s0004g01450.t01	Wine grape	cytosol, extracellular	51.75	41.21
KRG89889	Soybean	cytosol, plastid	51.75	41.16
PGSC0003DMT400081909	Potato	plastid	54.09	41.16
Solyc01g006540.2.1	Tomato	plastid	53.36	40.74
Solyc01g006560.2.1	Tomato	plastid	53.51	40.58
CDY61881	Canola	cytosol	21.05	40.56
KRH29669	Soybean	plastid	53.36	40.51
KRH24671	Soybean	cytosol, plastid	53.51	40.04
VIT_06s0004g01510.t01	Wine grape	plastid	52.63	39.96
KRH29668	Soybean	nucleus	52.78	39.85
KRG89888	Soybean	nucleus	52.49	39.76
HORVU5Hr1G055110.2	Barley	mitochondrion	20.32	39.38
KRH17965	Soybean	plastid	52.49	39.11
HORVU6Hr1G033600.1	Barley	plastid	51.17	39.06
CDY04196	Canola	plastid	50.73	39.03
Solyc12g011040.1.1	Tomato	nucleus, plastid	50.88	39.01
AT3G45140.1	Thale cress	plastid	51.02	38.95
CDX79416	Canola	plastid	51.17	38.72
KRH18682	Soybean	cytosol, mitochondrion	51.46	38.64
CDX67920	Canola	plastid	50.73	38.38
HORVU7Hr1G006320.4	Barley	plastid	51.9	38.3
Bra003526.1-P	Field mustard	plastid	50.58	38.27
HORVU5Hr1G001180.1	Barley	plastid	52.05	38.24
CDX91565	Canola	plastid	50.15	38.11
Bra004057.1-P	Field mustard	cytosol	49.42	37.93
Bra004060.1-P	Field mustard	plastid	49.85	37.93
CDY61036	Canola	plastid	48.98	37.68
Bra004059.1-P	Field mustard	plastid	47.37	37.41
HORVU6Hr1G000510.1	Barley	plastid	50.29	36.91
Bra022535.1-P	Field mustard	plastid	41.81	35.27
CDY61880	Canola	plastid	26.75	33.21
Bra004058.1-P	Field mustard	plastid	49.56	32.04
HORVU4Hr1G076570.6	Barley	cytosol, plastid	42.84	31.99
HORVU5Hr1G093770.1	Barley	cytosol	40.35	31.98
HORVU1Hr1G054390.4	Barley	cytosol	39.04	31.64
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	39.91	31.6
CDY07407	Canola	cytosol, plastid	50.29	31.36
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	40.06	31.21
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	21.2	29.71
HORVU5Hr1G117110.1	Barley	cytosol	37.28	28.75
HORVU2Hr1G115980.2	Barley	plastid	35.82	27.78
CDY07408	Canola	plastid	18.42	27.51
CDY70245	Canola	plastid	18.27	27.29
CDY70606	Canola	plastid	15.06	26.08
HORVU2Hr1G115960.1	Barley	plastid	35.09	25.95
CDY61882	Canola	plastid	12.13	21.45
CDY70843	Canola	cytosol	3.22	17.46

Protein Annotations

Gene3D:1.20.245.10	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12	UniProt:A0A287WGG3
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G050680	EnsemblPlants:HORVU7Hr1G050680.1
InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PRINTS:PR00087	PRINTS:PR00468
ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF66	SUPFAM:SSF48484
UniParc:UPI000B47DB39	SEG:seg	:	:	:	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A287WGG3]

Coordinates

chrchr7H:-:184310258..184314946

Molecular Weight (calculated)

74487.9 Da

IEP (calculated)

7.153

GRAVY (calculated)

-0.281

Length

684 amino acids

Sequence
(BLAST)

001: PYLPSQTPPG LQAYRKKDLA KKRGDGTGQR KATDRVYDYD VYNDLGSGEE LGASGSRPVL GGNKQFPYPR RCRTGRPRST KGTYVYTTKS RDTTYVLLQC
101: MNVCGTWVTR ANCVRADPQS ETRSGDVYVP RDEAFSEVKN VQFSVKTLQS VLHAAVPAVQ STLIDPNQGF PSFFVIDKLF EDGVELPRAE DLGFLRAAVP
201: RLLEFLRDGP GDKLLLFDAP ANVQKDKFAW LRDEEFARET LAGINPYAIE LVKEFPLKSK LDPAVYGPAE SAITAELLEA QMGHAMTVPE AVKNKRLFML
301: DFHDLFLPYV HKIRALQHTT MYGSRTIMFL TDDGTLRLLA IELTRPASPM MPQWRQVFTS STDTTKSWLW RMAKSHVRAH DAGHHELVTH WLRTHCAVEP
401: YILAANRQLS EMHPIFQLLR PHFRYTMRIN ALARSALING GGIIELTFSP QRYAMELSSV AYDKLWRFDM EALPADLVRR GMAEEDPTAE HGLKLAIKDY
501: PFANDGLLIW DAIKGWVQAY VSSYYPTAAS VTGDAELQAF WTEVRTEGHA DKKDAPWWPK LDTPESLAHT LTTIIWVAAA HHAAVNFGQY DFGGYFPNRP
601: SIARTNMPVE EPVDAAAFDK FLDNPDQALR ECFPSQVQAT LVMAVLDVLX XXXXXXXXXX XXXXXXXXXX XXSRSVWTSF KILL

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.