Factsheet for AT3G45140.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61034	Canola	cytosol	42.75	85.68
CDY72550	Canola	cytosol	30.36	84.74
CDY07409	Canola	cytosol	36.05	83.46
CDY70843	Canola	cytosol	11.5	81.75
CDX91565	Canola	plastid	78.91	78.56
CDX67920	Canola	plastid	79.02	78.32
Bra003526.1-P	Field mustard	plastid	78.79	78.1
CDX79416	Canola	plastid	78.79	78.1
CDY61881	Canola	cytosol	30.92	78.03
CDY16339	Canola	plastid	66.18	77.92
Bra022535.1-P	Field mustard	plastid	70.2	77.56
Bra004059.1-P	Field mustard	plastid	73.21	75.75
CDY04196	Canola	plastid	75.11	75.7
Bra004057.1-P	Field mustard	cytosol	75.0	75.42
CDY61036	Canola	plastid	73.55	74.13
Bra004060.1-P	Field mustard	plastid	74.22	73.97
Os12t0559934-00	Rice	cytosol	15.29	70.26
CDY61880	Canola	plastid	43.19	70.24
VIT_13s0064g01500.t01	Wine grape	cytosol	19.53	70.0
Solyc01g009680.2.1	Tomato	plastid	33.48	67.72
CDY70245	Canola	plastid	34.26	67.03
CDY07408	Canola	plastid	33.71	65.94
CDY70606	Canola	plastid	28.46	64.56
CDY61882	Canola	plastid	27.46	63.57
Bra004058.1-P	Field mustard	plastid	74.22	62.85
VIT_13s0064g01490.t01	Wine grape	cytosol	27.9	62.66
CDY07407	Canola	cytosol, plastid	75.56	61.71
HORVU3Hr1G047210.1	Barley	cytosol	14.84	61.29
PGSC0003DMT400020118	Potato	cytosol	47.1	60.89
VIT_13s0064g01480.t01	Wine grape	plastid	58.04	57.59
PGSC0003DMT400081909	Potato	plastid	56.47	56.28
Solyc01g006540.2.1	Tomato	plastid	55.92	55.92
KRH29669	Soybean	plastid	55.92	55.6
Solyc01g006560.2.1	Tomato	plastid	55.8	55.43
KRG89883	Soybean	cytosol, plastid	51.79	54.02
GSMUA_Achr3P11780_001	Banana	plastid	50.56	53.55
KRH29668	Soybean	nucleus	53.91	53.31
TraesCS7D01G029400.1	Wheat	cytosol	15.74	53.21
KRH24671	Soybean	cytosol, plastid	54.24	53.17
GSMUA_Achr9P12470_001	Banana	plastid	49.67	52.79
Solyc12g011040.1.1	Tomato	nucleus, plastid	52.46	52.69
TraesCS7A01G034900.1	Wheat	mitochondrion	17.08	52.22
OQU80925	Sorghum	cytosol	49.55	51.33
KRH17965	Soybean	plastid	52.46	51.2
HORVU7Hr1G050680.1	Barley	peroxisome	38.95	51.02
Zm00001d053675_P001	Maize	plastid	50.89	50.39
KRG89889	Soybean	cytosol, plastid	48.33	50.35
KXG29701	Sorghum	plastid	51.34	50.16
Zm00001d015852_P004	Maize	plastid	50.67	49.84
KRG89888	Soybean	nucleus	50.22	49.83
HORVU6Hr1G033600.1	Barley	plastid	49.67	49.67
KRH18682	Soybean	cytosol, mitochondrion	50.33	49.51
TraesCS6B01G014400.1	Wheat	cytosol	32.92	49.08
TraesCS6A01G166000.1	Wheat	golgi	49.33	49.06
Os08t0508800-01	Rice	nucleus, plasma membrane	50.56	49.03
TraesCS6B01G193400.1	Wheat	plastid	49.22	48.95
TraesCS4D01G347300.1	Wheat	cytosol	48.33	48.93
TraesCS6D01G154600.1	Wheat	plastid	49.0	48.72
Os02t0194700-01	Rice	plasma membrane	50.33	48.7
Os08t0509100-01	Rice	nucleus	50.67	48.25
TraesCS7A01G246200.1	Wheat	plastid	50.0	48.12
TraesCS7D01G244800.1	Wheat	plastid	50.0	48.07
TraesCS7B01G145200.1	Wheat	plastid	49.78	48.06
Zm00001d031449_P001	Maize	mitochondrion	49.78	46.65
TraesCS5D01G013400.1	Wheat	plastid	47.54	45.91
TraesCS5B01G006500.1	Wheat	plastid	47.54	45.91
TraesCS5A01G007900.1	Wheat	plastid	47.54	45.91
HORVU5Hr1G001180.1	Barley	plastid	47.66	45.86
Os12t0559200-01	Rice	plastid	46.88	45.55
Os12t0560200-00	Rice	cytosol	5.02	45.45
HORVU7Hr1G006320.4	Barley	plastid	46.54	44.98
HORVU6Hr1G000510.1	Barley	plastid	45.98	44.21
TraesCS5D01G041100.1	Wheat	plastid	46.09	43.7
TraesCS5B01G033000.1	Wheat	plastid	46.32	43.68
AT1G55020.1	Thale cress	cytosol	41.63	43.42
AT1G67560.1	Thale cress	plastid	44.2	43.18
TraesCS6D01G010100.1	Wheat	plastid	44.42	42.39
AT1G72520.1	Thale cress	plastid	43.3	41.9
AT1G17420.1	Thale cress	cytosol, plastid	42.86	41.78
AT3G22400.1	Thale cress	cytosol	39.29	39.73
TraesCS5A01G032800.1	Wheat	mitochondrion	37.95	39.58

Protein Annotations

Gene3D:1.20.245.10	MapMan:11.7.1.2	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
EntrezGene:823650	ProteinID:AEE77997.1	EMBL:AK119093	EMBL:AK222075	EMBL:AK230124	ProteinID:ANM64479.1
ArrayExpress:AT3G45140	EnsemblPlantsGene:AT3G45140	RefSeq:AT3G45140	TAIR:AT3G45140	RefSeq:AT3G45140-TAIR-G	EnsemblPlants:AT3G45140.1
TAIR:AT3G45140.1	EMBL:AY062611	Unigene:At.22079	ProteinID:CAB72152.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579
GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009617	GO:GO:0009620	GO:GO:0009695
GO:GO:0009719	GO:GO:0009753	GO:GO:0009941	GO:GO:0009987	GO:GO:0010597	GO:GO:0016020
GO:GO:0016165	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0034440	GO:GO:0046872
GO:GO:0051213	GO:GO:0055114	GO:GO:0080027	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433
EMBL:L23968	Symbol:LOX2	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	RefSeq:NP_001326504.1	RefSeq:NP_566875.1	UniProt:P38418
PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0006339	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF89	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000012E819	SEG:seg

Description

LOX2Lipoxygenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P38418]

Coordinates

chr3:+:16525245..16529352

Molecular Weight (calculated)

102051.0 Da

IEP (calculated)

5.318

GRAVY (calculated)

-0.466

Length

896 amino acids

Sequence
(BLAST)

001: MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.