Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0560200-00 | Rice | cytosol | 32.54 | 41.41 |
| CDY72550 | Canola | cytosol | 100.0 | 39.25 |
| VIT_13s0064g01500.t01 | Wine grape | cytosol | 65.08 | 32.8 |
| CDY61881 | Canola | cytosol | 89.68 | 31.83 |
| CDY07409 | Canola | cytosol | 91.27 | 29.72 |
| CDY61034 | Canola | cytosol | 97.62 | 27.52 |
| TraesCS7D01G029400.1 | Wheat | cytosol | 45.24 | 21.51 |
| TraesCS7A01G034900.1 | Wheat | mitochondrion | 44.44 | 19.11 |
| Solyc01g009680.2.1 | Tomato | plastid | 61.9 | 17.61 |
| CDY04196 | Canola | plastid | 95.24 | 13.5 |
| CDY61036 | Canola | plastid | 92.06 | 13.05 |
| CDX79416 | Canola | plastid | 91.27 | 12.72 |
| CDX67920 | Canola | plastid | 88.89 | 12.39 |
| CDX91565 | Canola | plastid | 84.92 | 11.89 |
| AT3G45140.1 | Thale cress | plastid | 81.75 | 11.5 |
| CDY07407 | Canola | cytosol, plastid | 96.03 | 11.03 |
| PGSC0003DMT400020118 | Potato | cytosol | 59.52 | 10.82 |
| CDY70916 | Canola | cytosol | 41.27 | 10.32 |
| KRH24671 | Soybean | cytosol, plastid | 65.08 | 8.97 |
| VIT_13s0064g01480.t01 | Wine grape | plastid | 64.29 | 8.97 |
| KRH29668 | Soybean | nucleus | 64.29 | 8.94 |
| Solyc01g006540.2.1 | Tomato | plastid | 62.7 | 8.82 |
| PGSC0003DMT400081909 | Potato | plastid | 62.7 | 8.79 |
| Solyc01g006560.2.1 | Tomato | plastid | 62.7 | 8.76 |
| KRG89883 | Soybean | cytosol, plastid | 59.52 | 8.73 |
| KRH29669 | Soybean | plastid | 61.9 | 8.66 |
| KRH17965 | Soybean | plastid | 60.32 | 8.28 |
| Os02t0194700-01 | Rice | plasma membrane | 60.32 | 8.21 |
| Solyc12g011040.1.1 | Tomato | nucleus, plastid | 57.94 | 8.18 |
| Zm00001d053675_P001 | Maize | plastid | 58.73 | 8.18 |
| TraesCS6B01G014400.1 | Wheat | cytosol | 38.89 | 8.15 |
| Zm00001d015852_P004 | Maize | plastid | 58.73 | 8.12 |
| HORVU6Hr1G033600.1 | Barley | plastid | 57.14 | 8.04 |
| TraesCS6A01G166000.1 | Wheat | golgi | 57.14 | 7.99 |
| TraesCS6B01G193400.1 | Wheat | plastid | 57.14 | 7.99 |
| TraesCS6D01G154600.1 | Wheat | plastid | 57.14 | 7.99 |
| OQU80925 | Sorghum | cytosol | 54.76 | 7.98 |
| KXG29701 | Sorghum | plastid | 57.94 | 7.96 |
| KRH18682 | Soybean | cytosol, mitochondrion | 57.14 | 7.9 |
| TraesCS4D01G347300.1 | Wheat | cytosol | 54.76 | 7.8 |
| KRG89889 | Soybean | cytosol, plastid | 53.17 | 7.79 |
| KRG89888 | Soybean | nucleus | 53.17 | 7.42 |
| TraesCS7B01G145200.1 | Wheat | plastid | 53.17 | 7.22 |
| TraesCS7A01G246200.1 | Wheat | plastid | 53.17 | 7.2 |
| TraesCS7D01G244800.1 | Wheat | plastid | 53.17 | 7.19 |
| Zm00001d031449_P001 | Maize | mitochondrion | 52.38 | 6.9 |
| CDX82146 | Canola | plastid | 46.03 | 6.82 |
| Os08t0508800-01 | Rice | nucleus, plasma membrane | 50.0 | 6.82 |
| Os08t0509100-01 | Rice | nucleus | 50.0 | 6.7 |
| TraesCS5B01G033000.1 | Wheat | plastid | 48.41 | 6.42 |
| TraesCS5D01G041100.1 | Wheat | plastid | 47.62 | 6.35 |
| CDY49853 | Canola | plastid | 46.03 | 6.31 |
| CDY64617 | Canola | cytosol | 45.24 | 6.2 |
| CDY21750 | Canola | cytosol, mitochondrion, plastid | 45.24 | 6.2 |
| HORVU7Hr1G006320.4 | Barley | plastid | 45.24 | 6.15 |
| TraesCS5A01G007900.1 | Wheat | plastid | 45.24 | 6.14 |
| TraesCS5D01G013400.1 | Wheat | plastid | 45.24 | 6.14 |
| TraesCS5B01G006500.1 | Wheat | plastid | 45.24 | 6.14 |
| HORVU5Hr1G001180.1 | Barley | plastid | 45.24 | 6.12 |
| CDX96769 | Canola | cytosol | 44.44 | 6.09 |
| Os12t0559200-01 | Rice | plastid | 44.44 | 6.07 |
| CDX81825 | Canola | cytosol | 43.65 | 5.98 |
| CDY12655 | Canola | plastid | 42.06 | 5.81 |
| HORVU6Hr1G000510.1 | Barley | plastid | 42.86 | 5.79 |
| CDY07417 | Canola | plastid | 41.27 | 5.66 |
| CDY51606 | Canola | plastid | 40.48 | 5.59 |
| CDY38326 | Canola | cytosol | 38.89 | 5.52 |
| CDY46325 | Canola | cytosol | 38.1 | 5.44 |
| TraesCS6D01G010100.1 | Wheat | plastid | 40.48 | 5.43 |
| CDY64191 | Canola | cytosol | 38.89 | 5.4 |
| TraesCS5A01G032800.1 | Wheat | mitochondrion | 32.54 | 4.77 |
| GSMUA_Achr3P11780_001 | Banana | plastid | 31.75 | 4.73 |
| CDY28879 | Canola | cytosol, endoplasmic reticulum, plastid | 40.48 | 4.55 |
| GSMUA_Achr9P12470_001 | Banana | plastid | 30.16 | 4.51 |
| CDY43490 | Canola | cytosol, plasma membrane | 41.27 | 4.32 |
| HORVU7Hr1G050680.1 | Barley | peroxisome | 17.46 | 3.22 |
| CDY70606 | Canola | plastid | 2.38 | 0.76 |
| CDY61882 | Canola | plastid | 0.0 | 0.0 |
| CDY70245 | Canola | plastid | 0.0 | 0.0 |
| HORVU3Hr1G047210.1 | Barley | cytosol | 0.0 | 0.0 |
| VIT_13s0064g01490.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDY07408 | Canola | plastid | 0.0 | 0.0 |
| CDY61880 | Canola | plastid | 0.0 | 0.0 |
| Os12t0559934-00 | Rice | cytosol | 0.0 | 0.0 |
| CDY16339 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.245.10 | MapMan:35.1 | GO:A0A078JTG0 | UniProt:A0A078JTG0 | EnsemblPlants:CDY70843 | ProteinID:CDY70843 |
| ProteinID:CDY70843.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00007911001 | InterPro:IPR013819 |
| InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_C_sf | PFAM:PF00305 | PFscan:PS51393 | PANTHER:PTHR11771 |
| PANTHER:PTHR11771:SF89 | SUPFAM:SSF48484 | UniParc:UPI0004EF3BB8 | SEG:seg | : | : |
Description
BnaCnng70040DBnaCnng70040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTG0]
Coordinates
chrLK043488:+:1032..1412
Molecular Weight (calculated)
14138.8 Da
IEP (calculated)
4.408
GRAVY (calculated)
-0.402
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVEEPTEEE LKEFYEDPEK TMLKTFPSKK QATIVMVTLD LLSAHSPDEE YLGENAEASW AHEPVIYAAY ERFKGKLQYL EGVIDERNVN VSLKNRTGAG
101: VVKYELLKPI SEPGVTGMGV PYSVSI
101: VVKYELLKPI SEPGVTGMGV PYSVSI
001: MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
Arabidopsis Description
LOX2Lipoxygenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P38418]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.