CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039948.1-P	Field mustard	cytosol	98.08	98.08
CDY46325	Canola	cytosol	91.32	91.84
AT3G22400.1	Thale cress	cytosol	91.09	91.2
CDY64191	Canola	cytosol	91.66	89.64
KRH35534	Soybean	cytosol	36.19	71.65
KRG91271	Soybean	cytosol	66.18	68.41
CDY70916	Canola	cytosol	37.99	66.87
VIT_05s0020g03170.t01	Wine grape	cytosol	65.73	66.55
PGSC0003DMT400081370	Potato	cytosol	65.5	66.25
Solyc09g075860.2.1	Tomato	cytosol, nucleus	64.83	65.56
GSMUA_Achr1P22970_001	Banana	cytosol	61.22	64.18
Solyc09g075870.1.1	Tomato	cytosol	61.56	63.93
KRG88464	Soybean	cytosol	32.58	63.38
TraesCS4A01G275800.1	Wheat	cytosol	16.69	61.92
GSMUA_AchrUn_...	Banana	cytosol	54.23	61.35
TraesCS4A01G359800.1	Wheat	cytosol	36.41	60.83
Os03t0700400-00	Rice	cytosol, plasma membrane	8.57	60.32
GSMUA_Achr1P24370_001	Banana	cytosol	57.27	59.98
GSMUA_AchrUn_...	Banana	cytosol	57.5	59.65
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	57.5	58.15
TraesCS6D01G122000.1	Wheat	cytosol	20.18	57.74
Os03t0699700-01	Rice	cytosol, plastid	55.47	57.01
EER93611	Sorghum	cytosol	56.93	56.87
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	56.48	56.48
EER93612	Sorghum	cytosol	55.13	56.47
Zm00001d033624_P001	Maize	cytosol	56.37	56.37
TraesCS4B01G037800.1	Wheat	cytosol	55.69	56.26
GSMUA_Achr6P25090_001	Banana	cytosol	53.1	56.21
TraesCS4A01G275900.1	Wheat	cytosol, unclear	55.36	55.92
GSMUA_Achr6P25110_001	Banana	cytosol	50.06	55.92
Zm00001d033623_P003	Maize	cytosol	54.57	55.82
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	55.24	55.81
TraesCS4D01G035100.1	Wheat	cytosol	55.13	55.69
Os03t0738600-01	Rice	plasma membrane, plastid	54.57	55.63
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.19	55.2
TraesCS5A01G378800.2	Wheat	cytosol	48.37	55.14
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	53.44	54.86
TraesCS5B01G382300.1	Wheat	cytosol, unclear	53.44	54.86
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	53.33	54.75
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	53.1	54.7
TraesCS5A01G378700.1	Wheat	cytosol	53.21	54.63
KXG37783	Sorghum	cytosol	54.9	54.54
TraesCS3B01G602500.1	Wheat	cytosol	54.0	54.37
TraesCS4B01G037700.3	Wheat	cytosol, golgi	52.76	54.36
TraesCS5B01G382400.1	Wheat	cytosol, golgi	52.2	54.09
TraesCS4D01G035200.1	Wheat	cytosol	50.51	54.04
HORVU5Hr1G093770.1	Barley	cytosol	52.2	53.65
TraesCS3B01G605700.1	Wheat	cytosol	53.33	53.45
TraesCS5B01G382600.1	Wheat	cytosol	51.86	53.43
EES04025	Sorghum	cytosol	52.2	53.34
TraesCS5A01G378900.1	Wheat	cytosol	51.86	53.24
EES04028	Sorghum	cytosol	52.2	53.04
Zm00001d042541_P002	Maize	cytosol	52.65	52.83
Zm00001d042540_P008	Maize	cytosol	52.31	52.02
TraesCS6A01G132200.1	Wheat	mitochondrion	50.96	51.78
TraesCS6A01G132500.1	Wheat	mitochondrion	50.96	51.78
TraesCS6B01G160400.1	Wheat	mitochondrion	50.96	51.78
TraesCS5A01G379000.1	Wheat	nucleus, unclear	44.87	51.69
TraesCS5D01G388800.1	Wheat	cytosol	51.97	51.39
TraesCS5D01G513100.1	Wheat	cytosol	49.94	51.04
GSMUA_Achr6P25080_001	Banana	cytosol	44.53	50.97
Os11t0575600-01	Rice	mitochondrion	49.83	50.92
HORVU5Hr1G117110.1	Barley	cytosol	50.28	50.28
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.51	50.0
TraesCS6B01G395700.1	Wheat	cytosol	45.43	49.63
CDY72550	Canola	cytosol	17.59	48.6
CDY07409	Canola	cytosol	20.86	47.8
CDY61034	Canola	cytosol	23.56	46.76
CDY61881	Canola	cytosol	18.15	45.35
CDY43490	Canola	cytosol, plasma membrane	61.1	45.05
TraesCS6D01G121900.1	Wheat	mitochondrion	22.21	44.07
CDX96769	Canola	cytosol	42.28	40.81
CDX81825	Canola	cytosol	42.28	40.81
CDY64617	Canola	cytosol	42.16	40.7
CDY21750	Canola	cytosol, mitochondrion, plastid	41.94	40.48
CDY49853	Canola	plastid	40.81	39.39
CDY04196	Canola	plastid	39.12	39.03
CDY70843	Canola	cytosol	5.52	38.89
CDX82146	Canola	plastid	37.2	38.82
CDY61036	Canola	plastid	38.78	38.7
CDX91565	Canola	plastid	39.12	38.56
CDY16339	Canola	plastid	32.69	38.11
CDX67920	Canola	plastid	38.67	37.94
CDX79416	Canola	plastid	38.56	37.83
CDY07417	Canola	plastid	38.56	37.25
CDY12655	Canola	plastid	38.11	37.02
CDY51606	Canola	plastid	37.99	36.91
CDY61880	Canola	plastid	20.74	33.39
CDY07407	Canola	cytosol, plastid	39.01	31.54
CDY70245	Canola	plastid	16.12	31.22
CDY07408	Canola	plastid	16.01	31.0
CDY28879	Canola	cytosol, endoplasmic reticulum, plastid	38.44	30.45
CDY70606	Canola	plastid	13.3	29.87
CDY61882	Canola	plastid	12.74	29.2
GSMUA_Achr6P25100_001	Banana	cytosol	44.31	3.27

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:A0A078HKY0	UniProt:A0A078HKY0	EnsemblPlants:CDY38326	ProteinID:CDY38326	ProteinID:CDY38326.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00065724001	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53
SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniPathway:UPA00382	UniParc:UPI0004EF2D61	SEG:seg

Description

BnaC05g30190DLipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078HKY0]

Coordinates

chrLK032421:-:328578..333786

Molecular Weight (calculated)

101366.0 Da

IEP (calculated)

7.050

GRAVY (calculated)

-0.488

Length

887 amino acids

Sequence
(BLAST)

001: MIHTDIAEIL CVKPKTKKRT KTMEEDVKKK KTKKTMKIQG EVVVMKKNLL DFKDAMASFL DRVHELLGRR VSLQLVSSLQ PDPANEKRGR LGKAAHLEKW
101: VTKIKTSVTA EETAFAVTFD WDESMGPPAA FVIKNHHHSQ FYLKSLTLRN FPGGEGGPIH FVCNSWIYPS HRYRSDRVFF SNKAYLPNET PELLKELRKE
201: ELKNLRDNEK GGELKEWDRV YDYAYYNDLG APDKGSDSAR PVLGGSPDFP YPRRGKTGRK PTKSDSKSES RLALLNLNIY VPRDERFSHV KFSDFLAYAL
301: KSVTQVLVPE IASVCDKTIN EFDSFEDVFH LYDGSIKLAN GHTISKLRDV IPWEMFRELV RNDGERFLKF PLPDVLKESR SAWRTDEEFA REMLAGLNPV
401: VISRLQEFPP KSNLDSTRYG NQHSSIREEH IKPHMNGLSV QEALGQNKLY ILDHHDALMP YLTRINSTNT KTYATRTLLL LQEDGTLKPL AIELSLPHAQ
501: GESHGAVSKI FTPAEKGVEG SVWQLAKAYA AVNDSGYHQL ISHWLKTHAV IEPFIIASNR QLSVIHPIFK LLHPHFRDTM NINALARHVL INSDGVLERT
601: VFPGRYAMEM SSSIYKNWVF TDQALPKDLL KRGVAVENPS SENGIELLIE DYPFAVDGLE IWSAIKTWVR EYCTIYYKND KAVQNDTEIQ EWWNELRTKG
701: HGDLQQESWW PSMQTCDDLI EACTIIIWVA SALHAAVNFG QYPYAGFLPN RPTVSRRFMP EPGTEEYTEL EENEEVAFLK TITPQLQTLL GISIIEILSM
801: HSTDEIYLGQ RDSPNWTADE EPLEAFKRFG KSLELIENNI IRRNNDKKFK NRTGPVNIPY TLLYPDTTDY TREGGLTGKG IPNSVSI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.